Functional clusters

Information

  • Type InterPro
  • Description U2 auxiliary factor small subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr6 5 CH_ccan_514 2 2 0.000153321
Capsella rubella scaffold_1 5 CH_cru_594 2 2 0.000438693
Durio zibethinus NW_019167982.1 5 CH_dzi_637 2 2 0.000973326
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_762 2 2 0.000448722
Gossypium raimondii Chr05 5 CH_gra_670 2 2 0.00080416
Lonicera japonica GWHAAZE00000005 5 CH_lonja_1063 2 2 0.000359324
Magnolia biondii Chr04 5 CH_mbi_1141 2 2 0.000485661
Olea europaea chr1 5 CH_oeu_666 2 2 0.000800683
Pisum sativum chr6LG2 5 CH_psa_678 2 2 0.000521635
Phaseolus vulgaris Chr05 5 CH_pvu_678 2 2 0.000734727
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_666 3 3 0.000000524459
Selaginella moellendorffii scaffold_24 5 CH_smo_376 2 2 0.000933707
Solanum pennellii Spenn-ch01 5 CH_spe_722 2 2 0.000266874
Theobroma cacao Chromosome_9 5 CH_tca_687 2 2 0.000439432
Tripterygium wilfordii NC_052236.1 5 CH_twi_526 2 2 0.00083626
Vaccinium macrocarpon scaffold00230_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_794 2 2 0.000929238
Vigna mungo CM024079.1 5 CH_vmu_595 2 2 0.000646141
Vanilla planifolia CM028154.1 5 CH_vpl_250 3 11 0.00000540224
Coffea canephora chr6 6 CH_ccan_514 2 2 0.000153321
Capsella rubella scaffold_1 6 CH_cru_594 2 2 0.000438693
Durio zibethinus NW_019167982.1 6 CH_dzi_637 2 2 0.000973326
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_762 2 2 0.000448722
Gossypium raimondii Chr05 6 CH_gra_670 2 2 0.00080416
Lonicera japonica GWHAAZE00000005 6 CH_lonja_1063 2 2 0.000359324
Magnolia biondii Chr04 6 CH_mbi_1141 2 2 0.000485661
Olea europaea chr1 6 CH_oeu_666 2 2 0.000800683
Pisum sativum chr6LG2 6 CH_psa_678 2 2 0.000521635
Phaseolus vulgaris Chr05 6 CH_pvu_678 2 2 0.000734727
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_666 3 3 0.000000524459
Selaginella moellendorffii scaffold_24 6 CH_smo_376 2 2 0.000933707
Solanum pennellii Spenn-ch01 6 CH_spe_722 2 2 0.000266874
Theobroma cacao Chromosome_9 6 CH_tca_687 2 2 0.000439432
Tripterygium wilfordii NC_052236.1 6 CH_twi_526 2 2 0.00083626
Vaccinium macrocarpon scaffold00230_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_794 2 2 0.000929238
Vigna mungo CM024079.1 6 CH_vmu_595 2 2 0.000646141
Vanilla planifolia CM028154.1 6 CH_vpl_250 3 11 0.00000540224

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001