Functional clusters

Information

  • Type InterPro
  • Description Growth factor receptor cysteine-rich domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group20 5 CH_ach_496 2 3 0.000488869
Erigeron canadensis Conyza_canadensis_scaffold:7 5 CH_eca_74 6 27 0.00000000000111658
Eucalyptus grandis Chr03 5 CH_egr_513 5 21 0.000000000450265
Malus domestica Chr08 5 CH_mdo_1349 2 4 0.000682538
Nelumbo nucifera chr1 5 CH_nnu_527 4 46 0.000322676
Oryza sativa ssp. japonica chr02 5 CH_osa_705 4 60 0.00050432
Populus trichocarpa Chr09 5 CH_ptr_447 4 27 0.0000050083
Zea mays 1 5 CH_zma_238 4 29 0.00000313024
Actinidia chinensis Lachesis_group20 6 CH_ach_496 2 3 0.000488869
Erigeron canadensis Conyza_canadensis_scaffold:7 6 CH_eca_74 6 27 0.00000000000111658
Eucalyptus grandis Chr03 6 CH_egr_513 5 21 0.000000000450265
Fragaria x ananassa Fvb2-4 6 CH_fan_1248 2 2 0.000832663
Malus domestica Chr08 6 CH_mdo_1349 2 4 0.000682538
Nelumbo nucifera chr1 6 CH_nnu_527 4 46 0.000322676
Oryza sativa ssp. japonica chr02 6 CH_osa_705 4 60 0.00050432
Populus trichocarpa Chr09 6 CH_ptr_447 4 27 0.0000050083
Zea mays 1 6 CH_zma_238 4 29 0.00000313024

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001