Functional clusters

Information

  • Type InterPro
  • Description Peptidase S1, PA clan

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 5 CH_amhyb_64 5 10 0.00000000146729
Aquilegia oxysepala CHR04 5 CH_aox_145 4 6 0.000000112353
Brassica carinata ChrC02 5 CH_bca_1480 3 7 0.000156848
Camellia sinensis var. sinensis Chr13 5 CH_camsi_143 7 21 0.0000000000000293226
Capsicum annuum PGAv.1.6.scaffold497 5 CH_can_147 6 13 0.0000000000057386
Cardamine hirsuta Chr8 5 CH_chi_447 3 4 0.0000381077
Cardamine hirsuta Chr2 5 CH_chi_550 3 5 0.0000952216
Daucus carota DCARv2_Chr1 5 CH_dca_99 5 5 0.0000000000622973
Durio zibethinus NW_019167926.1 5 CH_dzi_58 6 7 0.00000000000000596515
Erythranthe guttata scaffold_10 5 CH_egut_403 3 3 0.0000077067
Oryza sativa ssp. japonica chr07 5 CH_osa_347 4 7 0.00000275118
Oryza sativa ssp. japonica chr05 5 CH_osa_358 5 24 0.00000373644
Oryza sativa ssp. japonica chr09 5 CH_osa_376 4 8 0.00000549721
Oryza sativa ssp. japonica chr05 5 CH_osa_455 4 12 0.000038728
Oryza sativa ssp. japonica chr03 5 CH_osa_617 3 4 0.000271118
Oryza sativa ssp. japonica chr03 5 CH_osa_618 3 4 0.000271118
Petunia axillaris Peaxi162Scf00226 5 CH_pax_316 3 3 0.00000719496
Papaver somniferum NC_039361.1 5 CH_pso_812 3 4 0.0000300795
Populus trichocarpa Chr18 5 CH_ptr_161 5 6 0.0000000000168956
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_340 4 8 0.00000987791
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_654 3 4 0.000369491
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_655 3 4 0.000369491
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_765 3 5 0.000922623
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 6 CH_amhyb_64 5 10 0.00000000146729
Aquilegia oxysepala CHR04 6 CH_aox_145 4 6 0.000000112353
Brassica carinata ChrC02 6 CH_bca_1480 3 7 0.000156848
Camellia sinensis var. sinensis Chr13 6 CH_camsi_143 7 21 0.0000000000000293226
Capsicum annuum PGAv.1.6.scaffold497 6 CH_can_147 6 13 0.0000000000057386
Cardamine hirsuta Chr8 6 CH_chi_447 3 4 0.0000381077
Cardamine hirsuta Chr2 6 CH_chi_550 3 5 0.0000952216
Daucus carota DCARv2_Chr1 6 CH_dca_99 5 5 0.0000000000622973
Durio zibethinus NW_019167926.1 6 CH_dzi_58 6 7 0.00000000000000596515
Erythranthe guttata scaffold_10 6 CH_egut_403 3 3 0.0000077067
Oryza sativa ssp. japonica chr07 6 CH_osa_347 4 7 0.00000275118
Oryza sativa ssp. japonica chr05 6 CH_osa_358 5 24 0.00000373644
Oryza sativa ssp. japonica chr09 6 CH_osa_376 4 8 0.00000549721
Oryza sativa ssp. japonica chr05 6 CH_osa_455 4 12 0.000038728
Oryza sativa ssp. japonica chr03 6 CH_osa_617 3 4 0.000271118
Oryza sativa ssp. japonica chr03 6 CH_osa_618 3 4 0.000271118
Petunia axillaris Peaxi162Scf00226 6 CH_pax_316 3 3 0.00000719496
Papaver somniferum NC_039361.1 6 CH_pso_812 3 4 0.0000300795
Populus trichocarpa Chr18 6 CH_ptr_161 5 6 0.0000000000168956
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_340 4 8 0.00000987791
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_654 3 4 0.000369491
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_655 3 4 0.000369491
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_765 3 5 0.000922623

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001