Functional clusters
Information
- Type InterPro
- Description Six-hairpin glycosidase superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 5 | CH_aag_44 | 7 | 19 | 0.00000000000213818 |
| Amborella trichopoda | AmTr_v1.0_scaffold00007 | 5 | CH_atr_15 | 13 | 14 | 6.41097e-31 |
| Camellia sinensis var. sinensis | Chr3 | 5 | CH_camsi_150 | 8 | 19 | 0.0000000000000575504 |
| Ceratophyllum demersum | 6 | 5 | CH_cde_273 | 3 | 3 | 0.000172394 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_431 | 6 | 20 | 0.00000000251568 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_2612 | 3 | 4 | 0.000848143 |
| Anthoceros agrestis | Sc2ySwM_228 | 6 | CH_aag_44 | 7 | 19 | 0.00000000000213818 |
| Amborella trichopoda | AmTr_v1.0_scaffold00007 | 6 | CH_atr_15 | 13 | 14 | 6.41097e-31 |
| Camellia sinensis var. sinensis | Chr3 | 6 | CH_camsi_150 | 8 | 19 | 0.0000000000000575504 |
| Ceratophyllum demersum | 6 | 6 | CH_cde_273 | 3 | 3 | 0.000172394 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_431 | 6 | 20 | 0.00000000251568 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_2612 | 3 | 4 | 0.000848143 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |