Functional clusters

Information

  • Type InterPro
  • Description Eukaryotic translation initiation factor 3 subunit C, N-terminal domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 5 CH_amhyb_318 2 2 0.000252525
Brassica carinata ChrC07 5 CH_bca_1832 3 50 0.000469264
Camellia sinensis var. sinensis Chr10 5 CH_camsi_1399 2 6 0.000687758
Ceratophyllum demersum 4 5 CH_cde_325 2 2 0.000236939
Carpinus fangiana Cfa05 5 CH_cfa_611 2 2 0.000757346
Cardamine hirsuta Chr2 5 CH_chi_708 2 2 0.000414723
Chenopodium quinoa C_Quinoa_Scaffold_3970 5 CH_cqu_1068 2 2 0.000995025
Daucus carota DCARv2_Chr6 5 CH_dca_523 2 2 0.000191333
Fragaria vesca Fvb6 5 CH_fve_640 2 2 0.00017673
Gossypium hirsutum A09 5 CH_ghi_959 2 2 0.000160209
Gossypium hirsutum D09 5 CH_ghi_960 2 2 0.000160209
Gossypium raimondii Chr06 5 CH_gra_425 2 2 0.0000536107
Helianthus annuus HanXRQChr12 5 CH_han_1159 2 3 0.00069554
Lonicera japonica GWHAAZE00000002 5 CH_lonja_1130 2 5 0.00059882
Nicotiana tabacum Nitab4.5_0000070 5 CH_nta_206 2 2 0.000109727
Physcomitrium patens Chr04 5 CH_ppa_370 2 2 0.000612726
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_1122 2 2 0.000119596
Striga asiatica scaffold114 5 CH_sas_173 2 2 0.000187611
Solanum lycopersicum SL4.0ch01 5 CH_sly_294 3 4 0.000000082678
Utricularia gibba unitig_744 5 CH_ugi_146 2 2 0.0000820479
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 6 CH_amhyb_318 2 2 0.000252525
Brassica carinata ChrC07 6 CH_bca_1832 3 50 0.000469264
Camellia sinensis var. sinensis Chr10 6 CH_camsi_1399 2 6 0.000687758
Ceratophyllum demersum 4 6 CH_cde_325 2 2 0.000236939
Carpinus fangiana Cfa05 6 CH_cfa_611 2 2 0.000757346
Cardamine hirsuta Chr2 6 CH_chi_708 2 2 0.000414723
Chenopodium quinoa C_Quinoa_Scaffold_3970 6 CH_cqu_1068 2 2 0.000995025
Daucus carota DCARv2_Chr6 6 CH_dca_523 2 2 0.000191333
Fragaria vesca Fvb6 6 CH_fve_640 2 2 0.00017673
Gossypium hirsutum A09 6 CH_ghi_959 2 2 0.000160209
Gossypium hirsutum D09 6 CH_ghi_960 2 2 0.000160209
Gossypium raimondii Chr06 6 CH_gra_425 2 2 0.0000536107
Helianthus annuus HanXRQChr12 6 CH_han_1159 2 3 0.00069554
Lonicera japonica GWHAAZE00000002 6 CH_lonja_1130 2 5 0.00059882
Nicotiana tabacum Nitab4.5_0000070 6 CH_nta_206 2 2 0.000109727
Physcomitrium patens Chr04 6 CH_ppa_370 2 2 0.000612726
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_1122 2 2 0.000119596
Striga asiatica scaffold114 6 CH_sas_173 2 2 0.000187611
Solanum lycopersicum SL4.0ch01 6 CH_sly_294 3 4 0.000000082678
Utricularia gibba unitig_744 6 CH_ugi_146 2 2 0.0000820479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001