Functional clusters
Information
- Type InterPro
- Description Glycosyl hydrolases 36
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00021 | 5 | CH_atr_276 | 3 | 3 | 0.00000270745 |
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_618 | 3 | 3 | 0.000000693893 |
| Chara braunii | BFEA01000048 | 5 | CH_cbr_270 | 2 | 2 | 0.000215781 |
| Coffea canephora | chr6 | 5 | CH_ccan_665 | 2 | 3 | 0.000574945 |
| Coffea canephora | chr4 | 5 | CH_ccan_666 | 2 | 4 | 0.000574945 |
| Carpinus fangiana | Cfa02 | 5 | CH_cfa_280 | 3 | 3 | 0.00000103247 |
| Carica papaya | supercontig_4 | 5 | CH_cpa_183 | 3 | 3 | 0.000000759191 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1992 | 5 | CH_cqu_502 | 3 | 4 | 0.00000490227 |
| Malus domestica | Chr02 | 5 | CH_mdo_465 | 4 | 9 | 0.000000123204 |
| Malus domestica | Chr10 | 5 | CH_mdo_645 | 3 | 3 | 0.00000286889 |
| Nelumbo nucifera | chr8 | 5 | CH_nnu_141 | 4 | 5 | 0.00000000812005 |
| Salvia bowleyana | GWHASIU00000003 | 5 | CH_sbo_426 | 3 | 4 | 0.0000120321 |
| Salvia bowleyana | GWHASIU00000004 | 5 | CH_sbo_508 | 4 | 35 | 0.0000568234 |
| Simmondsia chinensis | GWHAASQ00000008 | 5 | CH_sci_74 | 4 | 4 | 0.000000000916691 |
| Trochodendron aralioides | group10 | 5 | CH_tar_394 | 3 | 3 | 0.00000441191 |
| Trochodendron aralioides | group1 | 5 | CH_tar_475 | 3 | 5 | 0.0000440867 |
| Utricularia gibba | unitig_0 | 5 | CH_ugi_89 | 3 | 3 | 0.00000686678 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_337 | 3 | 3 | 0.00000880795 |
| Vanilla planifolia | CM028154.1 | 5 | CH_vpl_129 | 5 | 46 | 0.0000000766322 |
| Zea mays | 1 | 5 | CH_zma_214 | 3 | 3 | 0.00000112161 |
| Zea mays | 2 | 5 | CH_zma_247 | 3 | 4 | 0.00000448546 |
| Amborella trichopoda | AmTr_v1.0_scaffold00021 | 6 | CH_atr_276 | 3 | 3 | 0.00000270745 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_618 | 3 | 3 | 0.000000693893 |
| Chara braunii | BFEA01000048 | 6 | CH_cbr_270 | 2 | 2 | 0.000215781 |
| Coffea canephora | chr6 | 6 | CH_ccan_665 | 2 | 3 | 0.000574945 |
| Coffea canephora | chr4 | 6 | CH_ccan_666 | 2 | 4 | 0.000574945 |
| Carpinus fangiana | Cfa02 | 6 | CH_cfa_280 | 3 | 3 | 0.00000103247 |
| Carica papaya | supercontig_4 | 6 | CH_cpa_183 | 3 | 3 | 0.000000759191 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1992 | 6 | CH_cqu_502 | 3 | 4 | 0.00000490227 |
| Malus domestica | Chr02 | 6 | CH_mdo_465 | 4 | 9 | 0.000000123204 |
| Malus domestica | Chr10 | 6 | CH_mdo_645 | 3 | 3 | 0.00000286889 |
| Nelumbo nucifera | chr8 | 6 | CH_nnu_141 | 4 | 5 | 0.00000000812005 |
| Salvia bowleyana | GWHASIU00000003 | 6 | CH_sbo_426 | 3 | 4 | 0.0000120321 |
| Salvia bowleyana | GWHASIU00000004 | 6 | CH_sbo_508 | 4 | 35 | 0.0000568234 |
| Simmondsia chinensis | GWHAASQ00000008 | 6 | CH_sci_74 | 4 | 4 | 0.000000000916691 |
| Trochodendron aralioides | group10 | 6 | CH_tar_394 | 3 | 3 | 0.00000441191 |
| Trochodendron aralioides | group1 | 6 | CH_tar_475 | 3 | 5 | 0.0000440867 |
| Utricularia gibba | unitig_0 | 6 | CH_ugi_89 | 3 | 3 | 0.00000686678 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_337 | 3 | 3 | 0.00000880795 |
| Vanilla planifolia | CM028154.1 | 6 | CH_vpl_129 | 5 | 46 | 0.0000000766322 |
| Zea mays | 1 | 6 | CH_zma_214 | 3 | 3 | 0.00000112161 |
| Zea mays | 2 | 6 | CH_zma_247 | 3 | 4 | 0.00000448546 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |