Functional clusters

Information

  • Type InterPro
  • Description Rubber elongation factor

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 5 CH_aag_265 2 3 0.000240761
Brassica carinata ChrB05 5 CH_bca_938 3 7 0.0000039572
Brassica napus C05 5 CH_bna_1425 2 2 0.00066822
Camellia sinensis var. sinensis Chr11 5 CH_camsi_1347 2 2 0.000458547
Cardamine hirsuta Chr4 5 CH_chi_707 2 2 0.000414723
Durio zibethinus NW_019168492.1 5 CH_dzi_577 2 2 0.000695233
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_687 2 2 0.000269233
Fragaria vesca Fvb4 5 CH_fve_832 2 2 0.000883652
Helianthus annuus HanXRQChr11 5 CH_han_617 4 46 0.00000354521
Lonicera japonica GWHAAZE00000006 5 CH_lonja_456 3 3 0.000000188297
Lactuca sativa Lsat_1_v8_lg_9 5 CH_lsa_25 9 15 7.60615e-26
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_1399 2 2 0.000597979
Anthoceros agrestis Sc2ySwM_228 6 CH_aag_265 2 3 0.000240761
Brassica carinata ChrB05 6 CH_bca_938 3 7 0.0000039572
Brassica napus C05 6 CH_bna_1425 2 2 0.00066822
Camellia sinensis var. sinensis Chr11 6 CH_camsi_1347 2 2 0.000458547
Cardamine hirsuta Chr4 6 CH_chi_707 2 2 0.000414723
Durio zibethinus NW_019168492.1 6 CH_dzi_577 2 2 0.000695233
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_687 2 2 0.000269233
Fragaria vesca Fvb4 6 CH_fve_832 2 2 0.000883652
Helianthus annuus HanXRQChr11 6 CH_han_617 4 46 0.00000354521
Lonicera japonica GWHAAZE00000006 6 CH_lonja_456 3 3 0.000000188297
Lactuca sativa Lsat_1_v8_lg_9 6 CH_lsa_25 9 15 7.60615e-26
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_1399 2 2 0.000597979

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001