Functional clusters
Information
- Type InterPro
- Description PPPDE peptidase domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | A08 | 5 | CH_bna_967 | 3 | 5 | 0.0000472065 |
| Coffea canephora | chr4 | 5 | CH_ccan_513 | 2 | 2 | 0.000153321 |
| Cardamine hirsuta | Chr7 | 5 | CH_chi_431 | 3 | 6 | 0.000023633 |
| Eutrema salsugineum | scaffold_1 | 5 | CH_esa_279 | 3 | 5 | 0.0000143449 |
| Simmondsia chinensis | GWHAASQ00000018 | 5 | CH_sci_185 | 3 | 3 | 0.00000179427 |
| Solanum tuberosum | ST4.03ch02 | 5 | CH_stu_240 | 4 | 5 | 0.00000000144311 |
| Brassica napus | A08 | 6 | CH_bna_967 | 3 | 5 | 0.0000472065 |
| Coffea canephora | chr4 | 6 | CH_ccan_513 | 2 | 2 | 0.000153321 |
| Cardamine hirsuta | Chr7 | 6 | CH_chi_431 | 3 | 6 | 0.000023633 |
| Eutrema salsugineum | scaffold_1 | 6 | CH_esa_279 | 3 | 5 | 0.0000143449 |
| Simmondsia chinensis | GWHAASQ00000018 | 6 | CH_sci_185 | 3 | 3 | 0.00000179427 |
| Solanum tuberosum | ST4.03ch02 | 6 | CH_stu_240 | 4 | 5 | 0.00000000144311 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |