Functional clusters
Information
- Type InterPro
- Description Protein of unknown function DUF829, TMEM53
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Cicer arietinum L. | Ca_LG8_v3 | 5 | CH_car_91 | 3 | 3 | 0.000000318032 |
Lactuca sativa | Lsat_1_v8_lg_1 | 5 | CH_lsa_868 | 2 | 2 | 0.00077101 |
Nicotiana tabacum | Nitab4.5_0000178 | 5 | CH_nta_319 | 2 | 2 | 0.000658364 |
Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_1167 | 3 | 17 | 0.00013596 |
Trochodendron aralioides | group4 | 5 | CH_tar_881 | 2 | 2 | 0.000600366 |
Vanilla planifolia | CM028154.1 | 5 | CH_vpl_215 | 3 | 5 | 0.0000016375 |
Cicer arietinum L. | Ca_LG8_v3 | 6 | CH_car_91 | 3 | 3 | 0.000000318032 |
Lactuca sativa | Lsat_1_v8_lg_1 | 6 | CH_lsa_868 | 2 | 2 | 0.00077101 |
Nicotiana tabacum | Nitab4.5_0000178 | 6 | CH_nta_319 | 2 | 2 | 0.000658364 |
Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_1167 | 3 | 17 | 0.00013596 |
Trochodendron aralioides | group4 | 6 | CH_tar_881 | 2 | 2 | 0.000600366 |
Vanilla planifolia | CM028154.1 | 6 | CH_vpl_215 | 3 | 5 | 0.0000016375 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |