Functional clusters

Information

  • Type InterPro
  • Description Protein of unknown function DUF819

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr1 5 CH_acertr_216 4 15 0.0000000215013
Avicennia marina ScioBoG_11560_HRSCAF_11609 5 CH_ama_116 2 2 0.0000862218
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 5 CH_amhyb_288 2 3 0.000252515
Amborella trichopoda AmTr_v1.0_scaffold00001 5 CH_atr_387 2 2 0.0000794407
Beta vulgaris Chr3_EL10_PGA_scaffold7 5 CH_bvu_406 2 3 0.000248365
Coffea canephora chr2 5 CH_ccan_102 3 6 0.00000000108829
Citrus clementina scaffold_9 5 CH_ccl_612 2 3 0.000246083
Cardamine hirsuta Chr8 5 CH_chi_606 2 2 0.000207361
Carica papaya supercontig_107 5 CH_cpa_321 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_2963 5 CH_cqu_372 3 5 0.000000336728
Durio zibethinus NW_019167827.1 5 CH_dzi_382 2 2 0.0000463489
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_536 2 2 0.0000448722
Erythranthe guttata scaffold_6 5 CH_egut_499 2 2 0.0000728147
Fragaria vesca Fvb7 5 CH_fve_545 2 2 0.0000589102
Helianthus annuus HanXRQChr14 5 CH_han_807 2 2 0.0000386429
Lonicera japonica GWHAAZE00000001 5 CH_lonja_741 2 2 0.0000598874
Magnolia biondii Chr17 5 CH_mbi_1139 2 2 0.000485661
Malus domestica Chr01 5 CH_mdo_972 2 2 0.000113763
Nelumbo nucifera chr1 5 CH_nnu_383 2 2 0.0000481684
Petunia axillaris Peaxi162Scf00023 5 CH_pax_421 2 2 0.0000703556
Prunus persica Pp02 5 CH_ppe_593 2 2 0.0000745962
Populus trichocarpa Chr17 5 CH_ptr_617 2 2 0.0001734
Quercus lobata 9 5 CH_qlo_857 3 6 0.00000031983
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_425 3 3 0.00000000238391
Rhododendron simsii chr03 5 CH_rsi_676 2 2 0.0000645307
Simmondsia chinensis GWHAASQ00000013 5 CH_sci_42 5 8 0.000000000000132433
Sechium edule LG13 5 CH_sed_223 3 7 0.00000267122
Sequoiadendron giganteum chr11 5 CH_sgi_2440 2 2 0.000487151
Sequoiadendron giganteum chr7 5 CH_sgi_997 3 3 0.0000000355983
Schrenkiella parvula ch6-6 5 CH_spa_93 3 3 0.0000000371957
Trochodendron aralioides group15 5 CH_tar_225 3 5 0.0000000540643
Theobroma cacao Chromosome_3 5 CH_tca_247 3 3 0.00000000804614
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_448 2 2 0.0000929238
Vitis vinifera chr16 5 CH_vvi_506 2 2 0.000076063
Acer truncatum chr1 6 CH_acertr_216 4 15 0.0000000215013
Avicennia marina ScioBoG_11560_HRSCAF_11609 6 CH_ama_116 2 2 0.0000862218
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 6 CH_amhyb_288 2 3 0.000252515
Amborella trichopoda AmTr_v1.0_scaffold00001 6 CH_atr_387 2 2 0.0000794407
Beta vulgaris Chr3_EL10_PGA_scaffold7 6 CH_bvu_406 2 3 0.000248365
Coffea canephora chr2 6 CH_ccan_102 3 6 0.00000000108829
Citrus clementina scaffold_9 6 CH_ccl_612 2 3 0.000246083
Cardamine hirsuta Chr8 6 CH_chi_606 2 2 0.000207361
Carica papaya supercontig_107 6 CH_cpa_321 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_2963 6 CH_cqu_372 3 5 0.000000336728
Durio zibethinus NW_019167827.1 6 CH_dzi_382 2 2 0.0000463489
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_536 2 2 0.0000448722
Erythranthe guttata scaffold_6 6 CH_egut_499 2 2 0.0000728147
Fragaria x ananassa Fvb7-1 6 CH_fan_1076 2 2 0.000518101
Fragaria vesca Fvb7 6 CH_fve_545 2 2 0.0000589102
Helianthus annuus HanXRQChr14 6 CH_han_807 2 2 0.0000386429
Lonicera japonica GWHAAZE00000001 6 CH_lonja_741 2 2 0.0000598874
Magnolia biondii Chr17 6 CH_mbi_1139 2 2 0.000485661
Malus domestica Chr01 6 CH_mdo_972 2 2 0.000113763
Nelumbo nucifera chr1 6 CH_nnu_383 2 2 0.0000481684
Petunia axillaris Peaxi162Scf00023 6 CH_pax_421 2 2 0.0000703556
Prunus persica Pp02 6 CH_ppe_593 2 2 0.0000745962
Populus trichocarpa Chr17 6 CH_ptr_617 2 2 0.0001734
Quercus lobata 9 6 CH_qlo_857 3 6 0.00000031983
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_425 3 3 0.00000000238391
Rhododendron simsii chr03 6 CH_rsi_676 2 2 0.0000645307
Simmondsia chinensis GWHAASQ00000013 6 CH_sci_42 5 8 0.000000000000132433
Sechium edule LG13 6 CH_sed_223 3 7 0.00000267122
Sequoiadendron giganteum chr11 6 CH_sgi_2440 2 2 0.000487151
Sequoiadendron giganteum chr7 6 CH_sgi_997 3 3 0.0000000355983
Schrenkiella parvula ch6-6 6 CH_spa_93 3 3 0.0000000371957
Trochodendron aralioides group15 6 CH_tar_225 3 5 0.0000000540643
Theobroma cacao Chromosome_3 6 CH_tca_247 3 3 0.00000000804614
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_448 2 2 0.0000929238
Vitis vinifera chr16 6 CH_vvi_506 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001