Functional clusters
Information
- Type InterPro
- Description Agenet-like domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-1 | 5 | CH_aar_212 | 3 | 4 | 0.0000059914 |
| Acer truncatum | chr1 | 5 | CH_acertr_258 | 4 | 5 | 0.0000000465146 |
| Actinidia chinensis | Lachesis_group9 | 5 | CH_ach_225 | 3 | 3 | 0.0000179709 |
| Brassica carinata | ChrB01 | 5 | CH_bca_1200 | 4 | 10 | 0.0000340502 |
| Capsicum annuum | PGAv.1.6.scaffold1156 | 5 | CH_can_167 | 5 | 6 | 0.000000000111297 |
| Corylus avellana | 4 | 5 | CH_cav_665 | 3 | 7 | 0.000251359 |
| Carpinus fangiana | Cfa05 | 5 | CH_cfa_279 | 3 | 3 | 0.00000103247 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_741 | 3 | 8 | 0.00053244 |
| Carica papaya | supercontig_52 | 5 | CH_cpa_58 | 4 | 4 | 0.00000000018045 |
| Daucus carota | DCARv2_Chr2 | 5 | CH_dca_470 | 3 | 4 | 0.000120967 |
| Erythranthe guttata | scaffold_3 | 5 | CH_egut_210 | 4 | 4 | 0.00000000354443 |
| Gossypium hirsutum | D03 | 5 | CH_ghi_118 | 7 | 7 | 7.54736e-18 |
| Gossypium hirsutum | D13 | 5 | CH_ghi_1232 | 3 | 6 | 0.000624816 |
| Gossypium hirsutum | A03 | 5 | CH_ghi_252 | 5 | 5 | 0.0000000000159645 |
| Gossypium raimondii | Chr13 | 5 | CH_gra_583 | 3 | 6 | 0.000349477 |
| Gossypium raimondii | Chr03 | 5 | CH_gra_61 | 7 | 7 | 3.80775e-18 |
| Lotus japonicus | chr3 | 5 | CH_lja_112 | 4 | 4 | 0.00000000425217 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_623 | 3 | 5 | 0.0000609846 |
| Malus domestica | Chr04 | 5 | CH_mdo_430 | 4 | 6 | 0.0000000582396 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_3 | 13 | 24 | 1.59869e-32 |
| Quercus lobata | 8 | 5 | CH_qlo_612 | 5 | 11 | 0.00000000291461 |
| Solanum pennellii | Spenn-ch06 | 5 | CH_spe_93 | 5 | 5 | 0.00000000000193123 |
| Solanum tuberosum | ST4.03ch06 | 5 | CH_stu_243 | 6 | 39 | 0.00000000191222 |
| Aethionema arabicum | LG-1 | 6 | CH_aar_212 | 3 | 4 | 0.0000059914 |
| Acer truncatum | chr1 | 6 | CH_acertr_258 | 4 | 5 | 0.0000000465146 |
| Actinidia chinensis | Lachesis_group9 | 6 | CH_ach_225 | 3 | 3 | 0.0000179709 |
| Brassica carinata | ChrB01 | 6 | CH_bca_1200 | 4 | 10 | 0.0000340502 |
| Capsicum annuum | PGAv.1.6.scaffold1156 | 6 | CH_can_167 | 5 | 6 | 0.000000000111297 |
| Corylus avellana | 4 | 6 | CH_cav_665 | 3 | 7 | 0.000251359 |
| Carpinus fangiana | Cfa05 | 6 | CH_cfa_279 | 3 | 3 | 0.00000103247 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_741 | 3 | 8 | 0.00053244 |
| Carica papaya | supercontig_52 | 6 | CH_cpa_58 | 4 | 4 | 0.00000000018045 |
| Daucus carota | DCARv2_Chr2 | 6 | CH_dca_470 | 3 | 4 | 0.000120967 |
| Erythranthe guttata | scaffold_3 | 6 | CH_egut_210 | 4 | 4 | 0.00000000354443 |
| Gossypium hirsutum | D03 | 6 | CH_ghi_118 | 7 | 7 | 7.54736e-18 |
| Gossypium hirsutum | D13 | 6 | CH_ghi_1232 | 3 | 6 | 0.000624816 |
| Gossypium hirsutum | A03 | 6 | CH_ghi_252 | 5 | 5 | 0.0000000000159645 |
| Gossypium raimondii | Chr13 | 6 | CH_gra_583 | 3 | 6 | 0.000349477 |
| Gossypium raimondii | Chr03 | 6 | CH_gra_61 | 7 | 7 | 3.80775e-18 |
| Lotus japonicus | chr3 | 6 | CH_lja_112 | 4 | 4 | 0.00000000425217 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_623 | 3 | 5 | 0.0000609846 |
| Malus domestica | Chr04 | 6 | CH_mdo_430 | 4 | 6 | 0.0000000582396 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_3 | 13 | 24 | 1.59869e-32 |
| Quercus lobata | 8 | 6 | CH_qlo_612 | 5 | 11 | 0.00000000291461 |
| Solanum pennellii | Spenn-ch06 | 6 | CH_spe_93 | 5 | 5 | 0.00000000000193123 |
| Solanum tuberosum | ST4.03ch06 | 6 | CH_stu_243 | 6 | 39 | 0.00000000191222 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |