Functional clusters

Information

  • Type InterPro
  • Description AWPM-19-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00025 5 CH_atr_576 2 2 0.000476644
Citrullus lanatus CG_Chr06 5 CH_cla_385 2 2 0.000887115
Erigeron canadensis Conyza_canadensis_scaffold:3 5 CH_eca_822 2 2 0.000673083
Marchantia polymorpha scaffold_22 5 CH_mpo_79 3 3 0.000000365945
Quercus lobata 6 5 CH_qlo_1704 2 2 0.000516289
Simmondsia chinensis GWHAASQ00000017 5 CH_sci_523 2 2 0.000851426
Sequoiadendron giganteum chr7 5 CH_sgi_201 7 8 2.89038e-20
Sequoiadendron giganteum chr4 5 CH_sgi_965 4 8 0.0000000242826
Selenicereus undatus Scaffold_33680 5 CH_sun_29 4 4 0.0000000000402895
Amborella trichopoda AmTr_v1.0_scaffold00025 6 CH_atr_576 2 2 0.000476644
Citrullus lanatus CG_Chr06 6 CH_cla_385 2 2 0.000887115
Erigeron canadensis Conyza_canadensis_scaffold:3 6 CH_eca_822 2 2 0.000673083
Marchantia polymorpha scaffold_22 6 CH_mpo_79 3 3 0.000000365945
Quercus lobata 6 6 CH_qlo_1704 2 2 0.000516289
Simmondsia chinensis GWHAASQ00000017 6 CH_sci_523 2 2 0.000851426
Sequoiadendron giganteum chr7 6 CH_sgi_201 7 8 2.89038e-20
Sequoiadendron giganteum chr4 6 CH_sgi_965 4 8 0.0000000242826
Selenicereus undatus Scaffold_33680 6 CH_sun_29 4 4 0.0000000000402895

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001