Functional clusters

Information

  • Type InterPro
  • Description Glutamine synthetase, catalytic domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 5 CH_aag_131 3 6 0.00000193184
Cannabis sativa NC_044372.1 5 CH_cansat_212 3 3 0.000000129358
Eucalyptus grandis Chr10 5 CH_egr_532 4 6 0.00000000113651
Manihot esculenta Chromosome08 5 CH_mes_723 2 2 0.000915947
Medicago truncatula chr1 5 CH_mtr_308 5 15 0.0000000000507662
Petunia axillaris Peaxi162Scf00110 5 CH_pax_323 3 6 0.00000831198
Pisum sativum chr6LG2 5 CH_psa_201 4 16 0.0000000541818
Quercus lobata 7 5 CH_qlo_1703 2 2 0.000516289
Sechium edule LG03 5 CH_sed_58 5 7 0.00000000000524921
Anthoceros agrestis Sc2ySwM_228 6 CH_aag_131 3 6 0.00000193184
Cannabis sativa NC_044372.1 6 CH_cansat_212 3 3 0.000000129358
Eucalyptus grandis Chr10 6 CH_egr_532 4 6 0.00000000113651
Manihot esculenta Chromosome08 6 CH_mes_723 2 2 0.000915947
Medicago truncatula chr1 6 CH_mtr_308 5 15 0.0000000000507662
Petunia axillaris Peaxi162Scf00110 6 CH_pax_323 3 6 0.00000831198
Pisum sativum chr6LG2 6 CH_psa_201 4 16 0.0000000541818
Quercus lobata 7 6 CH_qlo_1703 2 2 0.000516289
Sechium edule LG03 6 CH_sed_58 5 7 0.00000000000524921

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001