Functional clusters
Information
- Type InterPro
- Description Phospholipase-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_5 | 5 | CH_aly_229 | 4 | 11 | 0.000000140689 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_318 | 3 | 7 | 0.00000710722 |
| Brassica carinata | ChrC01 | 5 | CH_bca_1484 | 3 | 10 | 0.00016627 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 5 | CH_bvu_62 | 5 | 8 | 0.000000000000414363 |
| Camellia sinensis var. sinensis | Chr2 | 5 | CH_camsi_1471 | 2 | 5 | 0.000825322 |
| Capsicum annuum | PGAv.1.6.scaffold774 | 5 | CH_can_311 | 3 | 3 | 0.000000204743 |
| Daucus carota | DCARv2_Chr7 | 5 | CH_dca_732 | 2 | 6 | 0.000956541 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 5 | CH_eca_20 | 8 | 18 | 8.32803e-22 |
| Eucalyptus grandis | Chr09 | 5 | CH_egr_1279 | 2 | 2 | 0.000351165 |
| Helianthus annuus | HanXRQChr04 | 5 | CH_han_134 | 5 | 6 | 0.000000000000025287 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_543 | 3 | 4 | 0.00000107505 |
| Lotus japonicus | chr4 | 5 | CH_lja_195 | 3 | 3 | 0.000000153406 |
| Lonicera japonica | GWHAAZE00000004 | 5 | CH_lonja_916 | 2 | 2 | 0.000179662 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 5 | CH_lsa_610 | 2 | 2 | 0.0000514007 |
| Medicago truncatula | chr8 | 5 | CH_mtr_179 | 5 | 5 | 0.00000000000000538647 |
| Petunia axillaris | Peaxi162Scf00015 | 5 | CH_pax_629 | 2 | 2 | 0.000422134 |
| Punica granatum | NC_045128.1 | 5 | CH_pgr_501 | 2 | 2 | 0.000225107 |
| Quercus lobata | 9 | 5 | CH_qlo_1855 | 3 | 27 | 0.000979068 |
| Quercus lobata | 7 | 5 | CH_qlo_969 | 3 | 4 | 0.00000134328 |
| Striga asiatica | scaffold47 | 5 | CH_sas_200 | 2 | 2 | 0.000375223 |
| Solanum pennellii | Spenn-ch03 | 5 | CH_spe_850 | 2 | 2 | 0.000667186 |
| Solanum tuberosum | ST4.03ch03 | 5 | CH_stu_914 | 2 | 2 | 0.000768679 |
| Trochodendron aralioides | group7 | 5 | CH_tar_86 | 5 | 6 | 0.00000000000255332 |
| Tarenaya hassleriana | NW_010966933.1 | 5 | CH_tha_343 | 2 | 2 | 0.00069847 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_74 | 4 | 4 | 0.00000000000650703 |
| Arabidopsis lyrata | scaffold_5 | 6 | CH_aly_229 | 4 | 11 | 0.000000140689 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_318 | 3 | 7 | 0.00000710722 |
| Brassica carinata | ChrC01 | 6 | CH_bca_1484 | 3 | 10 | 0.00016627 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 6 | CH_bvu_62 | 5 | 8 | 0.000000000000414363 |
| Camellia sinensis var. sinensis | Chr2 | 6 | CH_camsi_1471 | 2 | 5 | 0.000825322 |
| Capsicum annuum | PGAv.1.6.scaffold774 | 6 | CH_can_311 | 3 | 3 | 0.000000204743 |
| Daucus carota | DCARv2_Chr7 | 6 | CH_dca_732 | 2 | 6 | 0.000956541 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 6 | CH_eca_20 | 8 | 18 | 8.32803e-22 |
| Eucalyptus grandis | Chr09 | 6 | CH_egr_1279 | 2 | 2 | 0.000351165 |
| Helianthus annuus | HanXRQChr04 | 6 | CH_han_134 | 5 | 6 | 0.000000000000025287 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_543 | 3 | 4 | 0.00000107505 |
| Lotus japonicus | chr4 | 6 | CH_lja_195 | 3 | 3 | 0.000000153406 |
| Lonicera japonica | GWHAAZE00000004 | 6 | CH_lonja_916 | 2 | 2 | 0.000179662 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 6 | CH_lsa_610 | 2 | 2 | 0.0000514007 |
| Medicago truncatula | chr8 | 6 | CH_mtr_179 | 5 | 5 | 0.00000000000000538647 |
| Petunia axillaris | Peaxi162Scf00015 | 6 | CH_pax_629 | 2 | 2 | 0.000422134 |
| Punica granatum | NC_045128.1 | 6 | CH_pgr_501 | 2 | 2 | 0.000225107 |
| Quercus lobata | 9 | 6 | CH_qlo_1855 | 3 | 27 | 0.000979068 |
| Quercus lobata | 7 | 6 | CH_qlo_969 | 3 | 4 | 0.00000134328 |
| Striga asiatica | scaffold47 | 6 | CH_sas_200 | 2 | 2 | 0.000375223 |
| Solanum pennellii | Spenn-ch03 | 6 | CH_spe_850 | 2 | 2 | 0.000667186 |
| Solanum tuberosum | ST4.03ch03 | 6 | CH_stu_914 | 2 | 2 | 0.000768679 |
| Trochodendron aralioides | group7 | 6 | CH_tar_86 | 5 | 6 | 0.00000000000255332 |
| Tarenaya hassleriana | NW_010966933.1 | 6 | CH_tha_343 | 2 | 2 | 0.00069847 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_74 | 4 | 4 | 0.00000000000650703 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |