Functional clusters
Information
- Type InterPro
- Description Protein of unknown function DUF724
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_11 | 5 | CH_amhyb_93 | 3 | 3 | 0.0000000425145 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_261 | 3 | 4 | 0.000000590914 |
| Brassica carinata | ChrB05 | 5 | CH_bca_1021 | 3 | 4 | 0.00000801796 |
| Brassica carinata | ChrC09 | 5 | CH_bca_338 | 4 | 5 | 0.00000000257097 |
| Brassica oleracea | C4 | 5 | CH_bol_892 | 2 | 2 | 0.000915212 |
| Daucus carota | DCARv2_Chr5 | 5 | CH_dca_76 | 5 | 7 | 0.00000000000335275 |
| Eutrema salsugineum | scaffold_22 | 5 | CH_esa_198 | 3 | 3 | 0.000000487118 |
| Helianthus annuus | HanXRQChr01 | 5 | CH_han_755 | 3 | 7 | 0.0000224072 |
| Nicotiana tabacum | Nitab4.5_0001295 | 5 | CH_nta_110 | 3 | 5 | 0.000000722306 |
| Punica granatum | NC_045128.1 | 5 | CH_pgr_500 | 2 | 2 | 0.000225107 |
| Prunus persica | Pp02 | 5 | CH_ppe_766 | 2 | 2 | 0.000447577 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_462 | 3 | 3 | 0.00000000953562 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_11 | 6 | CH_amhyb_93 | 3 | 3 | 0.0000000425145 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_261 | 3 | 4 | 0.000000590914 |
| Brassica carinata | ChrB05 | 6 | CH_bca_1021 | 3 | 4 | 0.00000801796 |
| Brassica carinata | ChrC09 | 6 | CH_bca_338 | 4 | 5 | 0.00000000257097 |
| Brassica oleracea | C4 | 6 | CH_bol_892 | 2 | 2 | 0.000915212 |
| Daucus carota | DCARv2_Chr5 | 6 | CH_dca_76 | 5 | 7 | 0.00000000000335275 |
| Eutrema salsugineum | scaffold_22 | 6 | CH_esa_198 | 3 | 3 | 0.000000487118 |
| Fragaria x ananassa | Fvb7-2 | 6 | CH_fan_1017 | 2 | 2 | 0.000388576 |
| Helianthus annuus | HanXRQChr01 | 6 | CH_han_755 | 3 | 7 | 0.0000224072 |
| Nicotiana tabacum | Nitab4.5_0001295 | 6 | CH_nta_110 | 3 | 5 | 0.000000722306 |
| Punica granatum | NC_045128.1 | 6 | CH_pgr_500 | 2 | 2 | 0.000225107 |
| Prunus persica | Pp02 | 6 | CH_ppe_766 | 2 | 2 | 0.000447577 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_462 | 3 | 3 | 0.00000000953562 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |