Functional clusters
Information
- Type InterPro
- Description Protein of unknown function DUF707
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group17 | 5 | CH_ach_191 | 3 | 3 | 0.00000361188 |
| Brassica carinata | ChrC05 | 5 | CH_bca_1154 | 3 | 4 | 0.0000231226 |
| Brassica carinata | ChrC05 | 5 | CH_bca_1406 | 3 | 6 | 0.000115546 |
| Chara braunii | BFEA01000098 | 5 | CH_cbr_86 | 3 | 7 | 0.000000271579 |
| Coffea canephora | chr8 | 5 | CH_ccan_577 | 2 | 3 | 0.000281088 |
| Coffea canephora | chr11 | 5 | CH_ccan_578 | 2 | 2 | 0.000281088 |
| Fragaria vesca | Fvb5 | 5 | CH_fve_813 | 3 | 19 | 0.000829582 |
| Helianthus annuus | HanXRQChr08 | 5 | CH_han_692 | 3 | 4 | 0.0000102115 |
| Magnolia biondii | Chr07 | 5 | CH_mbi_580 | 3 | 4 | 0.00000311293 |
| Magnolia biondii | Chr06 | 5 | CH_mbi_663 | 3 | 6 | 0.0000155588 |
| Oryza sativa ssp. japonica | chr06 | 5 | CH_osa_304 | 3 | 3 | 0.000000690329 |
| Rhododendron simsii | chr06 | 5 | CH_rsi_557 | 4 | 21 | 0.00000873116 |
| Sapria himalayana | scaffold6_19132642 | 5 | CH_shi_50 | 5 | 12 | 0.000000000029307 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_515 | 3 | 7 | 0.0000995935 |
| Actinidia chinensis | Lachesis_group17 | 6 | CH_ach_191 | 3 | 3 | 0.00000361188 |
| Brassica carinata | ChrC05 | 6 | CH_bca_1154 | 3 | 4 | 0.0000231226 |
| Brassica carinata | ChrC05 | 6 | CH_bca_1406 | 3 | 6 | 0.000115546 |
| Chara braunii | BFEA01000098 | 6 | CH_cbr_86 | 3 | 7 | 0.000000271579 |
| Coffea canephora | chr8 | 6 | CH_ccan_577 | 2 | 3 | 0.000281088 |
| Coffea canephora | chr11 | 6 | CH_ccan_578 | 2 | 2 | 0.000281088 |
| Fragaria vesca | Fvb5 | 6 | CH_fve_813 | 3 | 19 | 0.000829582 |
| Helianthus annuus | HanXRQChr08 | 6 | CH_han_692 | 3 | 4 | 0.0000102115 |
| Magnolia biondii | Chr07 | 6 | CH_mbi_580 | 3 | 4 | 0.00000311293 |
| Magnolia biondii | Chr06 | 6 | CH_mbi_663 | 3 | 6 | 0.0000155588 |
| Oryza sativa ssp. japonica | chr06 | 6 | CH_osa_304 | 3 | 3 | 0.000000690329 |
| Rhododendron simsii | chr06 | 6 | CH_rsi_557 | 4 | 21 | 0.00000873116 |
| Sapria himalayana | scaffold6_19132642 | 6 | CH_shi_50 | 5 | 12 | 0.000000000029307 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_515 | 3 | 7 | 0.0000995935 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |