Functional clusters

Information

  • Type InterPro
  • Description RNA polymerase Rpc34

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr1 5 CH_acertr_127 4 9 0.000000000132426
Brassica carinata ChrB04 5 CH_bca_1421 2 2 0.000128259
Lactuca sativa Lsat_1_v8_lg_3 5 CH_lsa_601 2 2 0.0000514007
Olea europaea chr18 5 CH_oeu_425 2 2 0.000160137
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1097 2 2 0.000119596
Sequoiadendron giganteum chr5 5 CH_sgi_1600 2 2 0.0000487151
Trochodendron aralioides group1 5 CH_tar_633 2 2 0.00018011
Acer truncatum chr1 6 CH_acertr_127 4 9 0.000000000132426
Brassica carinata ChrB04 6 CH_bca_1421 2 2 0.000128259
Lactuca sativa Lsat_1_v8_lg_3 6 CH_lsa_601 2 2 0.0000514007
Olea europaea chr18 6 CH_oeu_425 2 2 0.000160137
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1097 2 2 0.000119596
Sequoiadendron giganteum chr5 6 CH_sgi_1600 2 2 0.0000487151
Trochodendron aralioides group1 6 CH_tar_633 2 2 0.00018011

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001