Functional clusters
Information
- Type InterPro
- Description Caleosin-related
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr11 | 5 | CH_acertr_889 | 2 | 2 | 0.000422982 |
| Aquilegia oxysepala | CHR02 | 5 | CH_aox_229 | 3 | 6 | 0.00000385776 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_638 | 2 | 2 | 0.000802177 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_639 | 2 | 2 | 0.000802177 |
| Cannabis sativa | NC_044373.1 | 5 | CH_cansat_204 | 3 | 4 | 0.00000010348 |
| Capsicum annuum | PGAv.1.6.scaffold36 | 5 | CH_can_779 | 2 | 2 | 0.000495663 |
| Corylus avellana | 2 | 5 | CH_cav_304 | 3 | 5 | 0.00000176309 |
| Chara braunii | BFEA01000185 | 5 | CH_cbr_324 | 2 | 3 | 0.000647303 |
| Coffea canephora | chr3 | 5 | CH_ccan_432 | 2 | 4 | 0.0000766598 |
| Carpinus fangiana | Cfa02 | 5 | CH_cfa_94 | 5 | 9 | 0.000000000000652758 |
| Carica papaya | supercontig_2 | 5 | CH_cpa_491 | 2 | 2 | 0.000285198 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4329 | 5 | CH_cqu_320 | 3 | 3 | 0.000000117869 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_752 | 2 | 2 | 0.000956663 |
| Durio zibethinus | NW_019168026.1 | 5 | CH_dzi_269 | 3 | 4 | 0.00000154653 |
| Gossypium hirsutum | A09 | 5 | CH_ghi_350 | 4 | 5 | 0.00000000170883 |
| Gossypium hirsutum | D09 | 5 | CH_ghi_593 | 3 | 3 | 0.0000014224 |
| Glycine max | Gm09 | 5 | CH_gma_203 | 4 | 8 | 0.00000000080359 |
| Gossypium raimondii | Chr06 | 5 | CH_gra_274 | 3 | 3 | 0.000000362147 |
| Lupinus albus | Lalb_Chr10 | 5 | CH_lal_8 | 9 | 9 | 1.63462e-28 |
| Lotus japonicus | chr2 | 5 | CH_lja_218 | 3 | 4 | 0.000000306785 |
| Lonicera japonica | GWHAAZE00000003 | 5 | CH_lonja_275 | 4 | 5 | 0.000000000112761 |
| Manihot esculenta | Chromosome17 | 5 | CH_mes_81 | 6 | 6 | 5.35017e-19 |
| Medicago truncatula | chr1 | 5 | CH_mtr_1280 | 2 | 2 | 0.000410863 |
| Olea europaea | scaffold69 | 5 | CH_oeu_442 | 2 | 2 | 0.000160137 |
| Oryza sativa ssp. japonica | chr06 | 5 | CH_osa_290 | 3 | 3 | 0.00000035144 |
| Oryza sativa ssp. japonica | chr02 | 5 | CH_osa_291 | 3 | 3 | 0.00000035144 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_104 | 4 | 7 | 0.000000000074513 |
| Papaver somniferum | NW_020624376.1 | 5 | CH_pso_1119 | 3 | 20 | 0.000394166 |
| Phaseolus vulgaris | Chr03 | 5 | CH_pvu_246 | 3 | 4 | 0.000000129554 |
| Salvia bowleyana | GWHASIU00000006 | 5 | CH_sbo_678 | 2 | 3 | 0.000409466 |
| Sechium edule | LG06 | 5 | CH_sed_397 | 2 | 2 | 0.000214026 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_34 | 12 | 14 | 7.8147e-41 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_945 | 2 | 2 | 0.000880411 |
| Solanum pennellii | Spenn-ch01 | 5 | CH_spe_848 | 2 | 2 | 0.000667186 |
| Theobroma cacao | Chromosome_4 | 5 | CH_tca_366 | 3 | 5 | 0.000000804466 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 5 | CH_tpr_689 | 2 | 2 | 0.000454184 |
| Tripterygium wilfordii | NC_052234.1 | 5 | CH_twi_402 | 2 | 2 | 0.000167252 |
| Acer truncatum | chr11 | 6 | CH_acertr_889 | 2 | 2 | 0.000422982 |
| Aquilegia oxysepala | CHR02 | 6 | CH_aox_229 | 3 | 6 | 0.00000385776 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_638 | 2 | 2 | 0.000802177 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_639 | 2 | 2 | 0.000802177 |
| Cannabis sativa | NC_044373.1 | 6 | CH_cansat_204 | 3 | 4 | 0.00000010348 |
| Capsicum annuum | PGAv.1.6.scaffold36 | 6 | CH_can_779 | 2 | 2 | 0.000495663 |
| Corylus avellana | 2 | 6 | CH_cav_304 | 3 | 5 | 0.00000176309 |
| Chara braunii | BFEA01000185 | 6 | CH_cbr_324 | 2 | 3 | 0.000647303 |
| Coffea canephora | chr3 | 6 | CH_ccan_432 | 2 | 4 | 0.0000766598 |
| Carpinus fangiana | Cfa02 | 6 | CH_cfa_94 | 5 | 9 | 0.000000000000652758 |
| Carica papaya | supercontig_2 | 6 | CH_cpa_491 | 2 | 2 | 0.000285198 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4329 | 6 | CH_cqu_320 | 3 | 3 | 0.000000117869 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_752 | 2 | 2 | 0.000956663 |
| Durio zibethinus | NW_019168026.1 | 6 | CH_dzi_269 | 3 | 4 | 0.00000154653 |
| Gossypium hirsutum | A09 | 6 | CH_ghi_350 | 4 | 5 | 0.00000000170883 |
| Gossypium hirsutum | D09 | 6 | CH_ghi_593 | 3 | 3 | 0.0000014224 |
| Glycine max | Gm09 | 6 | CH_gma_203 | 4 | 8 | 0.00000000080359 |
| Gossypium raimondii | Chr06 | 6 | CH_gra_274 | 3 | 3 | 0.000000362147 |
| Lupinus albus | Lalb_Chr10 | 6 | CH_lal_8 | 9 | 9 | 1.63462e-28 |
| Lotus japonicus | chr2 | 6 | CH_lja_218 | 3 | 4 | 0.000000306785 |
| Lonicera japonica | GWHAAZE00000003 | 6 | CH_lonja_275 | 4 | 5 | 0.000000000112761 |
| Manihot esculenta | Chromosome17 | 6 | CH_mes_81 | 6 | 6 | 5.35017e-19 |
| Medicago truncatula | chr1 | 6 | CH_mtr_1280 | 2 | 2 | 0.000410863 |
| Olea europaea | scaffold69 | 6 | CH_oeu_442 | 2 | 2 | 0.000160137 |
| Oryza sativa ssp. japonica | chr06 | 6 | CH_osa_290 | 3 | 3 | 0.00000035144 |
| Oryza sativa ssp. japonica | chr02 | 6 | CH_osa_291 | 3 | 3 | 0.00000035144 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_104 | 4 | 7 | 0.000000000074513 |
| Papaver somniferum | NW_020624376.1 | 6 | CH_pso_1119 | 3 | 20 | 0.000394166 |
| Phaseolus vulgaris | Chr03 | 6 | CH_pvu_246 | 3 | 4 | 0.000000129554 |
| Salvia bowleyana | GWHASIU00000006 | 6 | CH_sbo_678 | 2 | 3 | 0.000409466 |
| Sechium edule | LG06 | 6 | CH_sed_397 | 2 | 2 | 0.000214026 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_34 | 12 | 14 | 7.8147e-41 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_945 | 2 | 2 | 0.000880411 |
| Solanum pennellii | Spenn-ch01 | 6 | CH_spe_848 | 2 | 2 | 0.000667186 |
| Theobroma cacao | Chromosome_4 | 6 | CH_tca_366 | 3 | 5 | 0.000000804466 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 6 | CH_tpr_689 | 2 | 2 | 0.000454184 |
| Tripterygium wilfordii | NC_052234.1 | 6 | CH_twi_402 | 2 | 2 | 0.000167252 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |