Functional clusters
Information
- Type InterPro
- Description Saf4/Yju2 protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 5 | CH_amhyb_23 | 6 | 8 | 0.0000000000000329337 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 5 | CH_amhyb_7 | 9 | 10 | 8.69237e-25 |
| Aquilegia oxysepala | CHR01 | 5 | CH_aox_157 | 4 | 23 | 0.000000205162 |
| Brassica carinata | ChrC02 | 5 | CH_bca_807 | 3 | 4 | 0.0000015352 |
| Brassica napus | C04 | 5 | CH_bna_187 | 5 | 12 | 0.0000000000374213 |
| Brassica napus | C04 | 5 | CH_bna_492 | 4 | 14 | 0.000000242544 |
| Brassica oleracea | C4 | 5 | CH_bol_169 | 4 | 8 | 0.00000000524089 |
| Brassica oleracea | C4 | 5 | CH_bol_647 | 3 | 13 | 0.000166583 |
| Carpinus fangiana | Cfa08 | 5 | CH_cfa_607 | 2 | 2 | 0.000757346 |
| Capsella rubella | scaffold_5 | 5 | CH_cru_331 | 3 | 6 | 0.0000032065 |
| Davidia involucrata | GWHABJS00000001 | 5 | CH_din_284 | 3 | 3 | 0.000000450236 |
| Eucalyptus grandis | Chr04 | 5 | CH_egr_271 | 7 | 27 | 0.00000000000000222016 |
| Gossypium hirsutum | D02 | 5 | CH_ghi_489 | 4 | 33 | 0.000000163334 |
| Gossypium raimondii | Chr05 | 5 | CH_gra_683 | 3 | 67 | 0.000823648 |
| Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_583 | 2 | 2 | 0.000158437 |
| Petunia axillaris | Peaxi162Scf00213 | 5 | CH_pax_703 | 2 | 2 | 0.000703556 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_1434 | 2 | 3 | 0.000717541 |
| Trochodendron aralioides | group8 | 5 | CH_tar_880 | 2 | 2 | 0.000600366 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 6 | CH_amhyb_23 | 6 | 8 | 0.0000000000000329337 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 6 | CH_amhyb_7 | 9 | 10 | 8.69237e-25 |
| Aquilegia oxysepala | CHR01 | 6 | CH_aox_157 | 4 | 23 | 0.000000205162 |
| Brassica carinata | ChrC02 | 6 | CH_bca_807 | 3 | 4 | 0.0000015352 |
| Brassica napus | C04 | 6 | CH_bna_187 | 5 | 12 | 0.0000000000374213 |
| Brassica napus | C04 | 6 | CH_bna_492 | 4 | 14 | 0.000000242544 |
| Brassica oleracea | C4 | 6 | CH_bol_169 | 4 | 8 | 0.00000000524089 |
| Brassica oleracea | C4 | 6 | CH_bol_647 | 3 | 13 | 0.000166583 |
| Carpinus fangiana | Cfa08 | 6 | CH_cfa_607 | 2 | 2 | 0.000757346 |
| Cucumis melo | chr00 | 6 | CH_cme_421 | 2 | 2 | 0.000400267 |
| Capsella rubella | scaffold_5 | 6 | CH_cru_331 | 3 | 6 | 0.0000032065 |
| Davidia involucrata | GWHABJS00000001 | 6 | CH_din_284 | 3 | 3 | 0.000000450236 |
| Eucalyptus grandis | Chr04 | 6 | CH_egr_271 | 7 | 27 | 0.00000000000000222016 |
| Gossypium hirsutum | D02 | 6 | CH_ghi_489 | 4 | 33 | 0.000000163334 |
| Gossypium raimondii | Chr05 | 6 | CH_gra_683 | 3 | 67 | 0.000823648 |
| Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_583 | 2 | 2 | 0.000158437 |
| Petunia axillaris | Peaxi162Scf00213 | 6 | CH_pax_703 | 2 | 2 | 0.000703556 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_1434 | 2 | 3 | 0.000717541 |
| Trochodendron aralioides | group8 | 6 | CH_tar_880 | 2 | 2 | 0.000600366 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |