Functional clusters

Information

  • Type InterPro
  • Description Protein of unknown function DUF538

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 5 CH_acertr_37 8 15 1.37747e-16
Acer truncatum chr5 5 CH_acertr_497 3 3 0.0000335102
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 5 CH_arhy_726 3 3 0.00000604342
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 5 CH_arhy_727 3 3 0.00000604342
Camellia sinensis var. sinensis Chr13 5 CH_camsi_1563 3 10 0.000981187
Camellia sinensis var. sinensis Chr2 5 CH_camsi_994 3 5 0.0000819369
Cannabis sativa NC_044370.1 5 CH_cansat_297 3 3 0.00000439817
Capsicum annuum PGAv.1.6.scaffold472 5 CH_can_522 3 4 0.0000630212
Corylus avellana 2 5 CH_cav_751 3 7 0.000474161
Carpinus fangiana Cfa02 5 CH_cfa_352 3 3 0.00001325
Carica papaya supercontig_9 5 CH_cpa_223 3 3 0.00000493474
Erigeron canadensis Conyza_canadensis_scaffold:3 5 CH_eca_406 3 3 0.00000465133
Fragaria vesca Fvb2 5 CH_fve_521 3 4 0.0000368603
Gossypium raimondii Chr12 5 CH_gra_403 3 3 0.0000363699
Hydrangea macrophylla Hma1.2p1_0494F.1 5 CH_hma_44 5 5 0.0000000000232484
Lotus japonicus chr5 5 CH_lja_383 3 4 0.0000543054
Lonicera japonica GWHAAZE00000141 5 CH_lonja_384 4 4 0.0000000202766
Lactuca sativa Lsat_1_v8_lg_6 5 CH_lsa_536 3 3 0.0000129833
Magnolia biondii Chr01 5 CH_mbi_309 4 5 0.0000000125653
Magnolia biondii Chr10 5 CH_mbi_684 3 4 0.0000217865
Malus domestica Chr03 5 CH_mdo_178 5 5 0.00000000000778558
Malus domestica Chr11 5 CH_mdo_765 3 3 0.000018197
Manihot esculenta Chromosome01 5 CH_mes_519 3 4 0.0000732494
Medicago truncatula chr4 5 CH_mtr_880 3 4 0.0000263248
Nelumbo nucifera chr4 5 CH_nnu_420 3 5 0.000113909
Oryza sativa ssp. japonica chr11 5 CH_osa_446 3 3 0.0000298724
Oryza sativa ssp. japonica chr11 5 CH_osa_548 3 4 0.000119408
Oryza sativa ssp. japonica chr07 5 CH_osa_67 8 20 0.00000000000000136543
Petunia axillaris Peaxi162Scf00264 5 CH_pax_240 4 9 0.000000509126
Prunus persica Pp08 5 CH_ppe_473 3 3 0.00000808845
Pisum sativum chr7LG7 5 CH_psa_344 3 3 0.0000072286
Populus trichocarpa Chr01 5 CH_ptr_489 3 3 0.0000203464
Quercus lobata 3 5 CH_qlo_1058 4 12 0.00000557587
Quercus lobata 12 5 CH_qlo_1320 3 4 0.0000648987
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_145 10 78 1.42303e-16
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_870 3 3 0.0000118242
Salvia bowleyana GWHASIU00000004 5 CH_sbo_304 4 6 0.000000133229
Sequoiadendron giganteum chr7 5 CH_sgi_750 4 4 0.00000000253723
Solanum lycopersicum SL4.0ch09 5 CH_sly_472 3 3 0.00000795817
Solanum lycopersicum SL4.0ch01 5 CH_sly_473 3 3 0.00000795817
Solanum pennellii Spenn-ch01 5 CH_spe_452 3 3 0.000009722
Solanum pennellii Spenn-ch02 5 CH_spe_453 3 3 0.000009722
Solanum pennellii Spenn-ch09 5 CH_spe_454 3 3 0.000009722
Solanum tuberosum ST4.03ch02 5 CH_stu_174 5 5 0.0000000000087895
Trochodendron aralioides group17 5 CH_tar_446 3 3 0.0000243034
Theobroma cacao Chromosome_1 5 CH_tca_498 3 4 0.0000427827
Trifolium pratense Tp57577_TGAC_v2_LG6 5 CH_tpr_370 3 3 0.00000979883
Vanilla planifolia JADCNL010000073.1 5 CH_vpl_2 13 14 6.79136e-33
Vitis vinifera chr14 5 CH_vvi_238 4 5 0.0000000201921
Acer truncatum chr10 6 CH_acertr_37 8 15 1.37747e-16
Acer truncatum chr5 6 CH_acertr_497 3 3 0.0000335102
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 6 CH_arhy_726 3 3 0.00000604342
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 6 CH_arhy_727 3 3 0.00000604342
Camellia sinensis var. sinensis Chr13 6 CH_camsi_1563 3 10 0.000981187
Camellia sinensis var. sinensis Chr2 6 CH_camsi_994 3 5 0.0000819369
Cannabis sativa NC_044370.1 6 CH_cansat_297 3 3 0.00000439817
Capsicum annuum PGAv.1.6.scaffold472 6 CH_can_522 3 4 0.0000630212
Corylus avellana 2 6 CH_cav_751 3 7 0.000474161
Carpinus fangiana Cfa02 6 CH_cfa_352 3 3 0.00001325
Carica papaya supercontig_9 6 CH_cpa_223 3 3 0.00000493474
Erigeron canadensis Conyza_canadensis_scaffold:3 6 CH_eca_406 3 3 0.00000465133
Fragaria vesca Fvb2 6 CH_fve_521 3 4 0.0000368603
Gossypium raimondii Chr12 6 CH_gra_403 3 3 0.0000363699
Hydrangea macrophylla Hma1.2p1_0494F.1 6 CH_hma_44 5 5 0.0000000000232484
Lotus japonicus chr5 6 CH_lja_383 3 4 0.0000543054
Lonicera japonica GWHAAZE00000141 6 CH_lonja_384 4 4 0.0000000202766
Lactuca sativa Lsat_1_v8_lg_6 6 CH_lsa_536 3 3 0.0000129833
Magnolia biondii Chr01 6 CH_mbi_309 4 5 0.0000000125653
Magnolia biondii Chr10 6 CH_mbi_684 3 4 0.0000217865
Malus domestica Chr03 6 CH_mdo_178 5 5 0.00000000000778558
Malus domestica Chr11 6 CH_mdo_765 3 3 0.000018197
Manihot esculenta Chromosome01 6 CH_mes_519 3 4 0.0000732494
Medicago truncatula chr4 6 CH_mtr_880 3 4 0.0000263248
Nelumbo nucifera chr4 6 CH_nnu_420 3 5 0.000113909
Oryza sativa ssp. japonica chr11 6 CH_osa_446 3 3 0.0000298724
Oryza sativa ssp. japonica chr11 6 CH_osa_548 3 4 0.000119408
Oryza sativa ssp. japonica chr07 6 CH_osa_67 8 20 0.00000000000000136543
Petunia axillaris Peaxi162Scf00264 6 CH_pax_240 4 9 0.000000509126
Prunus persica Pp08 6 CH_ppe_473 3 3 0.00000808845
Pisum sativum chr7LG7 6 CH_psa_344 3 3 0.0000072286
Populus trichocarpa Chr01 6 CH_ptr_489 3 3 0.0000203464
Quercus lobata 3 6 CH_qlo_1058 4 12 0.00000557587
Quercus lobata 12 6 CH_qlo_1320 3 4 0.0000648987
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_145 10 78 1.42303e-16
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_870 3 3 0.0000118242
Salvia bowleyana GWHASIU00000004 6 CH_sbo_304 4 6 0.000000133229
Sequoiadendron giganteum chr7 6 CH_sgi_750 4 4 0.00000000253723
Solanum lycopersicum SL4.0ch09 6 CH_sly_472 3 3 0.00000795817
Solanum lycopersicum SL4.0ch01 6 CH_sly_473 3 3 0.00000795817
Solanum pennellii Spenn-ch01 6 CH_spe_452 3 3 0.000009722
Solanum pennellii Spenn-ch02 6 CH_spe_453 3 3 0.000009722
Solanum pennellii Spenn-ch09 6 CH_spe_454 3 3 0.000009722
Solanum tuberosum ST4.03ch02 6 CH_stu_174 5 5 0.0000000000087895
Trochodendron aralioides group17 6 CH_tar_446 3 3 0.0000243034
Theobroma cacao Chromosome_1 6 CH_tca_498 3 4 0.0000427827
Trifolium pratense Tp57577_TGAC_v2_LG6 6 CH_tpr_370 3 3 0.00000979883
Vanilla planifolia JADCNL010000073.1 6 CH_vpl_2 13 14 6.79136e-33
Vitis vinifera chr14 6 CH_vvi_238 4 5 0.0000000201921

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001