Functional clusters
Information
- Type InterPro
- Description Peptidase A22B, signal peptide peptidase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 5 | CH_arhy_1055 | 3 | 6 | 0.000245434 |
| Gossypium hirsutum | D13 | 5 | CH_ghi_990 | 3 | 8 | 0.000195943 |
| Lupinus albus | Lalb_Chr04 | 5 | CH_lal_27 | 8 | 22 | 4.81907e-18 |
| Lonicera japonica | GWHAAZE00000003 | 5 | CH_lonja_226 | 6 | 22 | 0.00000000000221241 |
| Magnolia biondii | Chr17 | 5 | CH_mbi_604 | 3 | 5 | 0.00000424441 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_276 | 3 | 5 | 0.00000292274 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_765 | 3 | 7 | 0.0000181112 |
| Quercus lobata | 9 | 5 | CH_qlo_1014 | 3 | 6 | 0.00000279802 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_148 | 7 | 30 | 2.11983e-16 |
| Sapria himalayana | scaffold4_21100006 | 5 | CH_shi_70 | 4 | 7 | 0.000000000294417 |
| Vanilla planifolia | CM028161.1 | 5 | CH_vpl_184 | 3 | 3 | 0.000000687914 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 6 | CH_arhy_1055 | 3 | 6 | 0.000245434 |
| Gossypium hirsutum | D13 | 6 | CH_ghi_990 | 3 | 8 | 0.000195943 |
| Lupinus albus | Lalb_Chr04 | 6 | CH_lal_27 | 8 | 22 | 4.81907e-18 |
| Lonicera japonica | GWHAAZE00000003 | 6 | CH_lonja_226 | 6 | 22 | 0.00000000000221241 |
| Magnolia biondii | Chr17 | 6 | CH_mbi_604 | 3 | 5 | 0.00000424441 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_276 | 3 | 5 | 0.00000292274 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_765 | 3 | 7 | 0.0000181112 |
| Quercus lobata | 9 | 6 | CH_qlo_1014 | 3 | 6 | 0.00000279802 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_148 | 7 | 30 | 2.11983e-16 |
| Sapria himalayana | scaffold4_21100006 | 6 | CH_shi_70 | 4 | 7 | 0.000000000294417 |
| Vanilla planifolia | CM028161.1 | 6 | CH_vpl_184 | 3 | 3 | 0.000000687914 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |