Functional clusters

Information

  • Type InterPro
  • Description Transferrin receptor-like, dimerisation domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00056 5 CH_atr_491 2 2 0.000238322
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_207 3 3 0.0000000120814
Lotus japonicus chr2 5 CH_lja_185 3 4 0.000000122717
Malus domestica Chr02 5 CH_mdo_1235 2 2 0.000379212
Medicago truncatula chr6 5 CH_mtr_1069 2 2 0.000123259
Petunia axillaris Peaxi162Scf00944 5 CH_pax_416 2 2 0.0000703556
Physcomitrium patens Chr24 5 CH_ppa_305 2 2 0.000367636
Physcomitrium patens Chr08 5 CH_ppa_306 2 2 0.000367636
Amborella trichopoda AmTr_v1.0_scaffold00056 6 CH_atr_491 2 2 0.000238322
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_207 3 3 0.0000000120814
Lotus japonicus chr2 6 CH_lja_185 3 4 0.000000122717
Malus domestica Chr02 6 CH_mdo_1235 2 2 0.000379212
Medicago truncatula chr6 6 CH_mtr_1069 2 2 0.000123259
Petunia axillaris Peaxi162Scf00944 6 CH_pax_416 2 2 0.0000703556
Physcomitrium patens Chr24 6 CH_ppa_305 2 2 0.000367636
Physcomitrium patens Chr08 6 CH_ppa_306 2 2 0.000367636

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001