Functional clusters
Information
- Type InterPro
- Description Phosphoesterase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 5 | CH_acertr_316 | 3 | 3 | 0.000000260925 |
| Arabidopsis lyrata | scaffold_3 | 5 | CH_aly_364 | 3 | 7 | 0.00000800126 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 5 | CH_amhyb_460 | 2 | 2 | 0.000841751 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_274 | 3 | 8 | 0.0000013786 |
| Brassica carinata | ChrC07 | 5 | CH_bca_523 | 3 | 3 | 0.0000000822522 |
| Citrus clementina | scaffold_4 | 5 | CH_ccl_774 | 2 | 2 | 0.000820311 |
| Cardamine hirsuta | Chr3 | 5 | CH_chi_262 | 3 | 3 | 0.000000143334 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1352 | 5 | CH_cqu_387 | 3 | 3 | 0.000000555667 |
| Capsella rubella | scaffold_3 | 5 | CH_cru_244 | 3 | 3 | 0.000000160382 |
| Eutrema salsugineum | scaffold_13 | 5 | CH_esa_515 | 2 | 2 | 0.000761499 |
| Lupinus albus | Lalb_Chr05 | 5 | CH_lal_103 | 4 | 5 | 0.000000000151781 |
| Lotus japonicus | chr3 | 5 | CH_lja_606 | 2 | 2 | 0.000715077 |
| Lonicera japonica | GWHAAZE00000009 | 5 | CH_lonja_977 | 3 | 18 | 0.000245316 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_894 | 2 | 3 | 0.000925157 |
| Medicago truncatula | chr8 | 5 | CH_mtr_830 | 3 | 10 | 0.000010629 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_279 | 3 | 3 | 0.00000337248 |
| Prunus persica | Pp02 | 5 | CH_ppe_838 | 2 | 2 | 0.000745962 |
| Papaver somniferum | NC_039360.1 | 5 | CH_pso_608 | 3 | 6 | 0.0000018269 |
| Rhododendron simsii | chr13 | 5 | CH_rsi_477 | 3 | 3 | 0.000000749582 |
| Salvia bowleyana | GWHASIU00000001 | 5 | CH_sbo_533 | 3 | 19 | 0.000105159 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1195 | 3 | 3 | 0.00000042718 |
| Schrenkiella parvula | ch3-1 | 5 | CH_spa_364 | 2 | 2 | 0.00078734 |
| Trochodendron aralioides | group1 | 5 | CH_tar_954 | 2 | 2 | 0.000900549 |
| Theobroma cacao | Chromosome_5 | 5 | CH_tca_751 | 2 | 2 | 0.000732386 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_789 | 2 | 2 | 0.000929238 |
| Acer truncatum | chr2 | 6 | CH_acertr_316 | 3 | 3 | 0.000000260925 |
| Arabidopsis lyrata | scaffold_3 | 6 | CH_aly_364 | 3 | 7 | 0.00000800126 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 6 | CH_amhyb_460 | 2 | 2 | 0.000841751 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_274 | 3 | 8 | 0.0000013786 |
| Brassica carinata | ChrC07 | 6 | CH_bca_523 | 3 | 3 | 0.0000000822522 |
| Citrus clementina | scaffold_4 | 6 | CH_ccl_774 | 2 | 2 | 0.000820311 |
| Cardamine hirsuta | Chr3 | 6 | CH_chi_262 | 3 | 3 | 0.000000143334 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1352 | 6 | CH_cqu_387 | 3 | 3 | 0.000000555667 |
| Capsella rubella | scaffold_3 | 6 | CH_cru_244 | 3 | 3 | 0.000000160382 |
| Eutrema salsugineum | scaffold_13 | 6 | CH_esa_515 | 2 | 2 | 0.000761499 |
| Lupinus albus | Lalb_Chr05 | 6 | CH_lal_103 | 4 | 5 | 0.000000000151781 |
| Lotus japonicus | chr3 | 6 | CH_lja_606 | 2 | 2 | 0.000715077 |
| Lonicera japonica | GWHAAZE00000009 | 6 | CH_lonja_977 | 3 | 18 | 0.000245316 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_894 | 2 | 3 | 0.000925157 |
| Medicago truncatula | chr8 | 6 | CH_mtr_830 | 3 | 10 | 0.000010629 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_279 | 3 | 3 | 0.00000337248 |
| Prunus persica | Pp02 | 6 | CH_ppe_838 | 2 | 2 | 0.000745962 |
| Papaver somniferum | NC_039360.1 | 6 | CH_pso_608 | 3 | 6 | 0.0000018269 |
| Rhododendron simsii | chr13 | 6 | CH_rsi_477 | 3 | 3 | 0.000000749582 |
| Salvia bowleyana | GWHASIU00000001 | 6 | CH_sbo_533 | 3 | 19 | 0.000105159 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1195 | 3 | 3 | 0.00000042718 |
| Schrenkiella parvula | ch3-1 | 6 | CH_spa_364 | 2 | 2 | 0.00078734 |
| Trochodendron aralioides | group1 | 6 | CH_tar_954 | 2 | 2 | 0.000900549 |
| Theobroma cacao | Chromosome_5 | 6 | CH_tca_751 | 2 | 2 | 0.000732386 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_789 | 2 | 2 | 0.000929238 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |