Functional clusters

Information

  • Type InterPro
  • Description YTH domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_278 3 3 0.000000169139
Eucalyptus grandis Chr02 5 CH_egr_1410 2 2 0.000877912
Helianthus annuus HanXRQChr07 5 CH_han_137 5 5 0.0000000000000334852
Lonicera japonica GWHAAZE00000009 5 CH_lonja_301 5 16 0.00000000054106
Lactuca sativa Lsat_1_v8_lg_6 5 CH_lsa_502 3 5 0.00000653684
Salvia bowleyana GWHASIU00000006 5 CH_sbo_227 4 4 0.00000000169119
Solanum lycopersicum SL4.0ch08 5 CH_sly_349 3 3 0.000000434082
Solanum pennellii Spenn-ch08 5 CH_spe_314 3 3 0.000000249282
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_278 3 3 0.000000169139
Eucalyptus grandis Chr02 6 CH_egr_1410 2 2 0.000877912
Helianthus annuus HanXRQChr07 6 CH_han_137 5 5 0.0000000000000334852
Lonicera japonica GWHAAZE00000009 6 CH_lonja_301 5 16 0.00000000054106
Lactuca sativa Lsat_1_v8_lg_6 6 CH_lsa_502 3 5 0.00000653684
Salvia bowleyana GWHASIU00000006 6 CH_sbo_227 4 4 0.00000000169119
Solanum lycopersicum SL4.0ch08 6 CH_sly_349 3 3 0.000000434082
Solanum pennellii Spenn-ch08 6 CH_spe_314 3 3 0.000000249282

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001