Functional clusters
Information
- Type InterPro
- Description Nucleotide-sugar transporter
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB02 | 5 | CH_bca_759 | 3 | 3 | 0.00000105557 |
| Coffea canephora | chr7 | 5 | CH_ccan_378 | 2 | 5 | 0.0000425891 |
| Cardamine hirsuta | Chr5 | 5 | CH_chi_779 | 2 | 2 | 0.000691204 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_669 | 3 | 4 | 0.000000533944 |
| Salix brachista | GWHAAZH00000003 | 5 | CH_sbr_696 | 2 | 2 | 0.000945209 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_1194 | 3 | 3 | 0.00000042718 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_692 | 4 | 5 | 0.000000000364144 |
| Brassica carinata | ChrB02 | 6 | CH_bca_759 | 3 | 3 | 0.00000105557 |
| Coffea canephora | chr7 | 6 | CH_ccan_378 | 2 | 5 | 0.0000425891 |
| Cardamine hirsuta | Chr5 | 6 | CH_chi_779 | 2 | 2 | 0.000691204 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_669 | 3 | 4 | 0.000000533944 |
| Salix brachista | GWHAAZH00000003 | 6 | CH_sbr_696 | 2 | 2 | 0.000945209 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_1194 | 3 | 3 | 0.00000042718 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_692 | 4 | 5 | 0.000000000364144 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |