Functional clusters
Information
- Type InterPro
- Description Gamma-tubulin complex component protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group15 | 5 | CH_ach_181 | 3 | 4 | 0.00000212427 |
| Camellia sinensis var. sinensis | Chr11 | 5 | CH_camsi_520 | 4 | 14 | 0.000000143089 |
| Camellia sinensis var. sinensis | Chr4 | 5 | CH_camsi_870 | 3 | 7 | 0.000024269 |
| Corylus avellana | 6 | 5 | CH_cav_281 | 3 | 3 | 0.000000740683 |
| Carica papaya | supercontig_103 | 5 | CH_cpa_660 | 2 | 2 | 0.000950661 |
| Capsella rubella | scaffold_5 | 5 | CH_cru_496 | 3 | 16 | 0.000156876 |
| Glycine max | Gm04 | 5 | CH_gma_167 | 4 | 4 | 0.000000000117296 |
| Hydrangea macrophylla | Hma1.2p1_0260F.1 | 5 | CH_hma_639 | 2 | 2 | 0.000666519 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_454 | 3 | 3 | 0.000000188297 |
| Quercus lobata | 7 | 5 | CH_qlo_1048 | 3 | 7 | 0.00000489604 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_640 | 4 | 4 | 0.000000000072839 |
| Sapria himalayana | scaffold48_4099315 | 5 | CH_shi_29 | 5 | 7 | 0.000000000000424245 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_152 | 5 | CH_tpr_601 | 2 | 2 | 0.000227092 |
| Utricularia gibba | unitig_0 | 5 | CH_ugi_61 | 3 | 3 | 0.000000565499 |
| Actinidia chinensis | Lachesis_group15 | 6 | CH_ach_181 | 3 | 4 | 0.00000212427 |
| Camellia sinensis var. sinensis | Chr11 | 6 | CH_camsi_520 | 4 | 14 | 0.000000143089 |
| Camellia sinensis var. sinensis | Chr4 | 6 | CH_camsi_870 | 3 | 7 | 0.000024269 |
| Corylus avellana | 6 | 6 | CH_cav_281 | 3 | 3 | 0.000000740683 |
| Carica papaya | supercontig_103 | 6 | CH_cpa_660 | 2 | 2 | 0.000950661 |
| Capsella rubella | scaffold_5 | 6 | CH_cru_496 | 3 | 16 | 0.000156876 |
| Glycine max | Gm04 | 6 | CH_gma_167 | 4 | 4 | 0.000000000117296 |
| Hydrangea macrophylla | Hma1.2p1_0260F.1 | 6 | CH_hma_639 | 2 | 2 | 0.000666519 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_454 | 3 | 3 | 0.000000188297 |
| Quercus lobata | 7 | 6 | CH_qlo_1048 | 3 | 7 | 0.00000489604 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_640 | 4 | 4 | 0.000000000072839 |
| Sapria himalayana | scaffold48_4099315 | 6 | CH_shi_29 | 5 | 7 | 0.000000000000424245 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_152 | 6 | CH_tpr_601 | 2 | 2 | 0.000227092 |
| Utricularia gibba | unitig_0 | 6 | CH_ugi_61 | 3 | 3 | 0.000000565499 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |