Functional clusters

Information

  • Type InterPro
  • Description Vps52

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 5 CH_aag_191 2 2 0.0000802568
Arabidopsis lyrata scaffold_2 5 CH_aly_435 2 2 0.0000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 5 CH_arhy_1329 2 5 0.000898083
Arabidopsis thaliana Chr1 5 CH_ath_506 2 5 0.00028648
Brassica napus C06 5 CH_bna_553 3 10 0.000000620068
Camellia sinensis var. sinensis Chr6 5 CH_camsi_1468 2 4 0.000825322
Chara braunii BFEA01000068 5 CH_cbr_234 2 3 0.000215773
Ceratophyllum demersum 12 5 CH_cde_281 2 3 0.000236929
Capsella rubella scaffold_2 5 CH_cru_513 2 3 0.000219338
Magnolia biondii Chr13 5 CH_mbi_1026 2 2 0.000291397
Magnolia biondii Chr16 5 CH_mbi_1027 2 3 0.000291397
Rhododendron simsii chr02 5 CH_rsi_791 2 2 0.000193592
Sequoiadendron giganteum chr10 5 CH_sgi_1670 2 2 0.0000487151
Selenicereus undatus Scaffold_33673 5 CH_sun_246 2 3 0.000217984
Vanilla planifolia CM028151.1 5 CH_vpl_132 3 3 0.0000000818945
Anthoceros agrestis Sc2ySwM_228 6 CH_aag_191 2 2 0.0000802568
Arabidopsis lyrata scaffold_2 6 CH_aly_435 2 2 0.0000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 6 CH_arhy_1329 2 5 0.000898083
Arabidopsis thaliana Chr1 6 CH_ath_506 2 5 0.00028648
Brassica napus C06 6 CH_bna_553 3 10 0.000000620068
Camellia sinensis var. sinensis Chr6 6 CH_camsi_1468 2 4 0.000825322
Chara braunii BFEA01000068 6 CH_cbr_234 2 3 0.000215773
Ceratophyllum demersum 12 6 CH_cde_281 2 3 0.000236929
Capsella rubella scaffold_2 6 CH_cru_513 2 3 0.000219338
Magnolia biondii Chr13 6 CH_mbi_1026 2 2 0.000291397
Magnolia biondii Chr16 6 CH_mbi_1027 2 3 0.000291397
Rhododendron simsii chr02 6 CH_rsi_791 2 2 0.000193592
Sequoiadendron giganteum chr10 6 CH_sgi_1670 2 2 0.0000487151
Selenicereus undatus Scaffold_33673 6 CH_sun_246 2 3 0.000217984
Vanilla planifolia CM028151.1 6 CH_vpl_132 3 3 0.0000000818945

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001