Functional clusters

Information

  • Type InterPro
  • Description Mei2-like, C-terminal RNA recognition motif

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr11 5 CH_ccan_463 2 3 0.0000894371
Fragaria vesca Fvb2 5 CH_fve_171 4 4 0.00000000012881
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1166 3 17 0.00013596
Sequoiadendron giganteum chr1 5 CH_sgi_1342 3 3 0.00000199351
Sequoiadendron giganteum chr2 5 CH_sgi_185 8 13 3.39554e-21
Solanum lycopersicum SL4.0ch01 5 CH_sly_82 6 7 1.88281e-16
Solanum pennellii Spenn-ch01 5 CH_spe_71 5 5 0.0000000000000135638
Solanum tuberosum ST4.03ch01 5 CH_stu_117 5 5 0.000000000000013036
Coffea canephora chr11 6 CH_ccan_463 2 3 0.0000894371
Fragaria x ananassa Fvb2-1 6 CH_fan_530 3 3 0.00000336138
Fragaria x ananassa Fvb2-3 6 CH_fan_648 3 4 0.0000134424
Fragaria vesca Fvb2 6 CH_fve_171 4 4 0.00000000012881
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1166 3 17 0.00013596
Sequoiadendron giganteum chr1 6 CH_sgi_1342 3 3 0.00000199351
Sequoiadendron giganteum chr2 6 CH_sgi_185 8 13 3.39554e-21
Solanum lycopersicum SL4.0ch01 6 CH_sly_82 6 7 1.88281e-16
Solanum pennellii Spenn-ch01 6 CH_spe_71 5 5 0.0000000000000135638
Solanum tuberosum ST4.03ch01 6 CH_stu_117 5 5 0.000000000000013036

Available child term results

Ontology identifier Description Number of clusters
IPR034454 MEI2-like, RNA recognition motif 3 2
IPR034458 Terminal EAR1-like, RNA recognition motif 3 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001