Functional clusters

Information

  • Type InterPro
  • Description Sas10/Utp3/C1D

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00032 5 CH_atr_488 2 2 0.000238322
Brassica carinata Contig938 5 CH_bca_1656 2 2 0.000320646
Camellia sinensis var. sinensis Chr5 5 CH_camsi_1299 3 30 0.000447083
Carya illinoinensis Chr01 5 CH_cil_809 2 2 0.000619828
Eucalyptus grandis Chr08 5 CH_egr_1184 2 2 0.000175582
Lonicera japonica GWHAAZE00000007 5 CH_lonja_1218 2 2 0.000898311
Sequoiadendron giganteum chr9 5 CH_sgi_2064 2 2 0.000146145
Vanilla planifolia CM028150.1 5 CH_vpl_535 2 2 0.000221664
Amborella trichopoda AmTr_v1.0_scaffold00032 6 CH_atr_488 2 2 0.000238322
Brassica carinata Contig938 6 CH_bca_1656 2 2 0.000320646
Camellia sinensis var. sinensis Chr5 6 CH_camsi_1299 3 30 0.000447083
Carya illinoinensis Chr01 6 CH_cil_809 2 2 0.000619828
Eucalyptus grandis Chr08 6 CH_egr_1184 2 2 0.000175582
Lonicera japonica GWHAAZE00000007 6 CH_lonja_1218 2 2 0.000898311
Sequoiadendron giganteum chr9 6 CH_sgi_2064 2 2 0.000146145
Vanilla planifolia CM028150.1 6 CH_vpl_535 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001