Functional clusters

Information

  • Type InterPro
  • Description Ubiquitin-like-conjugating enzyme Atg3/Atg10

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 5 CH_arhy_368 4 9 0.00000000127762
Brassica carinata ChrB05 5 CH_bca_2139 2 2 0.000961939
Beta vulgaris Chr5_EL10_PGA_scaffold2 5 CH_bvu_424 2 2 0.000248375
Chara braunii BFEA01000305 5 CH_cbr_176 2 2 0.0000719269
Ceratophyllum demersum 3 5 CH_cde_315 2 2 0.000236939
Malus domestica Chr07 5 CH_mdo_1234 2 2 0.000379212
Sequoiadendron giganteum chr10 5 CH_sgi_2063 2 2 0.000146145
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 6 CH_arhy_368 4 9 0.00000000127762
Brassica carinata ChrB05 6 CH_bca_2139 2 2 0.000961939
Beta vulgaris Chr5_EL10_PGA_scaffold2 6 CH_bvu_424 2 2 0.000248375
Chara braunii BFEA01000305 6 CH_cbr_176 2 2 0.0000719269
Ceratophyllum demersum 3 6 CH_cde_315 2 2 0.000236939
Malus domestica Chr07 6 CH_mdo_1234 2 2 0.000379212
Sequoiadendron giganteum chr10 6 CH_sgi_2063 2 2 0.000146145

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001