Functional clusters
Information
- Type InterPro
- Description Diacylglycerol acyltransferase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group11 | 5 | CH_ach_517 | 2 | 2 | 0.000543213 |
| Arabidopsis lyrata | scaffold_5 | 5 | CH_aly_338 | 3 | 5 | 0.0000036585 |
| Aquilegia oxysepala | CHR06 | 5 | CH_aox_486 | 2 | 2 | 0.000481193 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_608 | 2 | 2 | 0.000601633 |
| Brassica carinata | ChrB07 | 5 | CH_bca_686 | 3 | 3 | 0.000000559315 |
| Brassica napus | A02 | 5 | CH_bna_245 | 4 | 5 | 0.00000000046472 |
| Brassica napus | C02 | 5 | CH_bna_816 | 3 | 6 | 0.0000117787 |
| Brassica oleracea | C2 | 5 | CH_bol_382 | 3 | 5 | 0.00000264369 |
| Corylus avellana | 2 | 5 | CH_cav_727 | 2 | 2 | 0.000460017 |
| Coffea canephora | chr7 | 5 | CH_ccan_679 | 2 | 11 | 0.000638821 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_82 | 6 | 7 | 1.63855e-17 |
| Ceratophyllum demersum | 8 | 5 | CH_cde_509 | 2 | 2 | 0.000789796 |
| Carya illinoinensis | Chr07 | 5 | CH_cil_808 | 2 | 2 | 0.000619828 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 5 | CH_cqu_422 | 3 | 4 | 0.00000113139 |
| Capsella rubella | scaffold_5 | 5 | CH_cru_153 | 4 | 5 | 0.000000000738682 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 5 | CH_eca_138 | 4 | 5 | 0.000000000284588 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_390 | 5 | 7 | 0.00000000000237782 |
| Eucalyptus grandis | Chr09 | 5 | CH_egr_550 | 4 | 5 | 0.00000000214986 |
| Gossypium hirsutum | A11 | 5 | CH_ghi_177 | 5 | 5 | 0.0000000000000326679 |
| Gossypium hirsutum | D11 | 5 | CH_ghi_178 | 5 | 5 | 0.0000000000000326679 |
| Gossypium raimondii | Chr07 | 5 | CH_gra_175 | 4 | 5 | 0.000000000485324 |
| Helianthus annuus | HanXRQChr14 | 5 | CH_han_105 | 6 | 8 | 4.34645e-16 |
| Hydrangea macrophylla | Hma1.2p1_0332F.1 | 5 | CH_hma_174 | 3 | 3 | 0.000000647896 |
| Lupinus albus | Lalb_Chr18 | 5 | CH_lal_689 | 2 | 2 | 0.000524824 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_448 | 3 | 4 | 0.000000283024 |
| Malus domestica | Chr02 | 5 | CH_mdo_1405 | 2 | 2 | 0.000796344 |
| Manihot esculenta | Chromosome09 | 5 | CH_mes_288 | 3 | 3 | 0.000000111865 |
| Manihot esculenta | Chromosome01 | 5 | CH_mes_722 | 2 | 2 | 0.000915947 |
| Medicago truncatula | chr8 | 5 | CH_mtr_1422 | 2 | 2 | 0.000862813 |
| Nelumbo nucifera | chr6 | 5 | CH_nnu_629 | 2 | 3 | 0.000866982 |
| Punica granatum | NC_045128.1 | 5 | CH_pgr_338 | 3 | 5 | 0.00000709158 |
| Punica granatum | NC_045131.1 | 5 | CH_pgr_363 | 3 | 6 | 0.0000141802 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_289 | 3 | 4 | 0.00000137124 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_313 | 3 | 5 | 0.0000034276 |
| Papaver somniferum | NC_039362.1 | 5 | CH_pso_1257 | 2 | 2 | 0.000811057 |
| Populus trichocarpa | Chr13 | 5 | CH_ptr_223 | 4 | 5 | 0.00000000207071 |
| Populus trichocarpa | Chr01 | 5 | CH_ptr_246 | 4 | 6 | 0.00000000621065 |
| Populus trichocarpa | Chr05 | 5 | CH_ptr_395 | 3 | 3 | 0.00000143327 |
| Quercus lobata | 3 | 5 | CH_qlo_1744 | 3 | 37 | 0.000619583 |
| Quercus lobata | CM012294 | 5 | CH_qlo_1778 | 2 | 2 | 0.000774433 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_531 | 3 | 3 | 0.0000000476781 |
| Striga asiatica | scaffold132 | 5 | CH_sas_199 | 2 | 2 | 0.000375223 |
| Salvia bowleyana | GWHASIU00000008 | 5 | CH_sbo_334 | 4 | 27 | 0.000000623216 |
| Simmondsia chinensis | GWHAASQ00000007 | 5 | CH_sci_283 | 2 | 2 | 0.0000851426 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_924 | 3 | 3 | 0.0000000142393 |
| Selenicereus undatus | Scaffold_33679 | 5 | CH_sun_332 | 2 | 2 | 0.000435983 |
| Theobroma cacao | Chromosome_4 | 5 | CH_tca_292 | 3 | 3 | 0.0000000804614 |
| Utricularia gibba | unitig_748 | 5 | CH_ugi_374 | 2 | 2 | 0.000820479 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_225 | 3 | 3 | 0.000000259057 |
| Vigna mungo | CM024069.1 | 5 | CH_vmu_168 | 3 | 3 | 0.000000125253 |
| Vitis vinifera | chr4 | 5 | CH_vvi_775 | 2 | 2 | 0.00076063 |
| Vitis vinifera | chr14 | 5 | CH_vvi_776 | 2 | 2 | 0.00076063 |
| Zea mays | 3 | 5 | CH_zma_518 | 2 | 2 | 0.000766969 |
| Actinidia chinensis | Lachesis_group11 | 6 | CH_ach_517 | 2 | 2 | 0.000543213 |
| Arabidopsis lyrata | scaffold_5 | 6 | CH_aly_338 | 3 | 5 | 0.0000036585 |
| Aquilegia oxysepala | CHR06 | 6 | CH_aox_486 | 2 | 2 | 0.000481193 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_608 | 2 | 2 | 0.000601633 |
| Brassica carinata | ChrB07 | 6 | CH_bca_686 | 3 | 3 | 0.000000559315 |
| Brassica napus | A02 | 6 | CH_bna_245 | 4 | 5 | 0.00000000046472 |
| Brassica napus | C02 | 6 | CH_bna_816 | 3 | 6 | 0.0000117787 |
| Brassica oleracea | C2 | 6 | CH_bol_382 | 3 | 5 | 0.00000264369 |
| Corylus avellana | 2 | 6 | CH_cav_727 | 2 | 2 | 0.000460017 |
| Coffea canephora | chr7 | 6 | CH_ccan_679 | 2 | 11 | 0.000638821 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_82 | 6 | 7 | 1.63855e-17 |
| Ceratophyllum demersum | 8 | 6 | CH_cde_509 | 2 | 2 | 0.000789796 |
| Carya illinoinensis | Chr07 | 6 | CH_cil_808 | 2 | 2 | 0.000619828 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 6 | CH_cqu_422 | 3 | 4 | 0.00000113139 |
| Capsella rubella | scaffold_5 | 6 | CH_cru_153 | 4 | 5 | 0.000000000738682 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 6 | CH_eca_138 | 4 | 5 | 0.000000000284588 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_390 | 5 | 7 | 0.00000000000237782 |
| Eucalyptus grandis | Chr09 | 6 | CH_egr_550 | 4 | 5 | 0.00000000214986 |
| Gossypium hirsutum | A11 | 6 | CH_ghi_177 | 5 | 5 | 0.0000000000000326679 |
| Gossypium hirsutum | D11 | 6 | CH_ghi_178 | 5 | 5 | 0.0000000000000326679 |
| Gossypium raimondii | Chr07 | 6 | CH_gra_175 | 4 | 5 | 0.000000000485324 |
| Helianthus annuus | HanXRQChr14 | 6 | CH_han_105 | 6 | 8 | 4.34645e-16 |
| Hydrangea macrophylla | Hma1.2p1_0332F.1 | 6 | CH_hma_174 | 3 | 3 | 0.000000647896 |
| Lupinus albus | Lalb_Chr18 | 6 | CH_lal_689 | 2 | 2 | 0.000524824 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_448 | 3 | 4 | 0.000000283024 |
| Malus domestica | Chr02 | 6 | CH_mdo_1405 | 2 | 2 | 0.000796344 |
| Manihot esculenta | Chromosome09 | 6 | CH_mes_288 | 3 | 3 | 0.000000111865 |
| Manihot esculenta | Chromosome01 | 6 | CH_mes_722 | 2 | 2 | 0.000915947 |
| Medicago truncatula | chr8 | 6 | CH_mtr_1422 | 2 | 2 | 0.000862813 |
| Nelumbo nucifera | chr6 | 6 | CH_nnu_629 | 2 | 3 | 0.000866982 |
| Punica granatum | NC_045128.1 | 6 | CH_pgr_338 | 3 | 5 | 0.00000709158 |
| Punica granatum | NC_045131.1 | 6 | CH_pgr_363 | 3 | 6 | 0.0000141802 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_289 | 3 | 4 | 0.00000137124 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_313 | 3 | 5 | 0.0000034276 |
| Papaver somniferum | NC_039362.1 | 6 | CH_pso_1257 | 2 | 2 | 0.000811057 |
| Populus trichocarpa | Chr13 | 6 | CH_ptr_223 | 4 | 5 | 0.00000000207071 |
| Populus trichocarpa | Chr01 | 6 | CH_ptr_246 | 4 | 6 | 0.00000000621065 |
| Populus trichocarpa | Chr05 | 6 | CH_ptr_395 | 3 | 3 | 0.00000143327 |
| Quercus lobata | 3 | 6 | CH_qlo_1744 | 3 | 37 | 0.000619583 |
| Quercus lobata | CM012294 | 6 | CH_qlo_1778 | 2 | 2 | 0.000774433 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_531 | 3 | 3 | 0.0000000476781 |
| Striga asiatica | scaffold132 | 6 | CH_sas_199 | 2 | 2 | 0.000375223 |
| Salvia bowleyana | GWHASIU00000008 | 6 | CH_sbo_334 | 4 | 27 | 0.000000623216 |
| Simmondsia chinensis | GWHAASQ00000007 | 6 | CH_sci_283 | 2 | 2 | 0.0000851426 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_924 | 3 | 3 | 0.0000000142393 |
| Selenicereus undatus | Scaffold_33679 | 6 | CH_sun_332 | 2 | 2 | 0.000435983 |
| Theobroma cacao | Chromosome_4 | 6 | CH_tca_292 | 3 | 3 | 0.0000000804614 |
| Utricularia gibba | unitig_748 | 6 | CH_ugi_374 | 2 | 2 | 0.000820479 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_225 | 3 | 3 | 0.000000259057 |
| Vigna mungo | CM024069.1 | 6 | CH_vmu_168 | 3 | 3 | 0.000000125253 |
| Vitis vinifera | chr4 | 6 | CH_vvi_775 | 2 | 2 | 0.00076063 |
| Vitis vinifera | chr14 | 6 | CH_vvi_776 | 2 | 2 | 0.00076063 |
| Zea mays | 3 | 6 | CH_zma_518 | 2 | 2 | 0.000766969 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |