Functional clusters
Information
- Type InterPro
- Description Histone H2A/H2B/H3
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_15 | 5 | CH_amhyb_60 | 5 | 7 | 0.00000000112502 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 5 | CH_arhy_558 | 4 | 6 | 0.000000442965 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 5 | CH_arhy_867 | 3 | 3 | 0.0000372689 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 5 | CH_bvu_105 | 5 | 6 | 0.000000000501411 |
| Camellia sinensis var. sinensis | Chr4 | 5 | CH_camsi_1249 | 3 | 5 | 0.00031121 |
| Carica papaya | supercontig_190 | 5 | CH_cpa_198 | 4 | 10 | 0.00000165078 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 5 | CH_cqu_485 | 4 | 6 | 0.00000303465 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 5 | CH_cqu_486 | 4 | 6 | 0.00000303465 |
| Durio zibethinus | NW_019168159.1 | 5 | CH_dzi_505 | 3 | 4 | 0.000319423 |
| Gossypium hirsutum | D01 | 5 | CH_ghi_1361 | 3 | 4 | 0.000973941 |
| Gossypium raimondii | Chr02 | 5 | CH_gra_458 | 3 | 3 | 0.000106937 |
| Helianthus annuus | HanXRQChr08 | 5 | CH_han_228 | 9 | 48 | 0.0000000000253937 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_479 | 4 | 6 | 0.000000347111 |
| Magnolia biondii | Chr14 | 5 | CH_mbi_645 | 4 | 11 | 0.0000103125 |
| Manihot esculenta | Chromosome04 | 5 | CH_mes_609 | 3 | 4 | 0.000317156 |
| Medicago truncatula | chr4 | 5 | CH_mtr_152 | 8 | 12 | 4.12432e-16 |
| Medicago truncatula | chr2 | 5 | CH_mtr_398 | 6 | 15 | 0.00000000222078 |
| Prunus persica | Pp06 | 5 | CH_ppe_556 | 4 | 16 | 0.0000533323 |
| Striga asiatica | scaffold75 | 5 | CH_sas_127 | 3 | 3 | 0.0000536142 |
| Simmondsia chinensis | GWHAASQ00000006 | 5 | CH_sci_268 | 4 | 14 | 0.0000850589 |
| Selenicereus undatus | Scaffold_33675 | 5 | CH_sun_163 | 3 | 5 | 0.0000645725 |
| Trochodendron aralioides | group7 | 5 | CH_tar_352 | 5 | 15 | 0.00000144505 |
| Theobroma cacao | Chromosome_9 | 5 | CH_tca_765 | 3 | 7 | 0.000821433 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_15 | 6 | CH_amhyb_60 | 5 | 7 | 0.00000000112502 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 6 | CH_arhy_558 | 4 | 6 | 0.000000442965 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 6 | CH_arhy_867 | 3 | 3 | 0.0000372689 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 6 | CH_bvu_105 | 5 | 6 | 0.000000000501411 |
| Camellia sinensis var. sinensis | Chr4 | 6 | CH_camsi_1249 | 3 | 5 | 0.00031121 |
| Carica papaya | supercontig_190 | 6 | CH_cpa_198 | 4 | 10 | 0.00000165078 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 6 | CH_cqu_485 | 4 | 6 | 0.00000303465 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 6 | CH_cqu_486 | 4 | 6 | 0.00000303465 |
| Durio zibethinus | NW_019168159.1 | 6 | CH_dzi_505 | 3 | 4 | 0.000319423 |
| Gossypium hirsutum | D01 | 6 | CH_ghi_1361 | 3 | 4 | 0.000973941 |
| Gossypium raimondii | Chr02 | 6 | CH_gra_458 | 3 | 3 | 0.000106937 |
| Helianthus annuus | HanXRQChr08 | 6 | CH_han_228 | 9 | 48 | 0.0000000000253937 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_479 | 4 | 6 | 0.000000347111 |
| Magnolia biondii | Chr14 | 6 | CH_mbi_645 | 4 | 11 | 0.0000103125 |
| Manihot esculenta | Chromosome04 | 6 | CH_mes_609 | 3 | 4 | 0.000317156 |
| Medicago truncatula | chr4 | 6 | CH_mtr_152 | 8 | 12 | 4.12432e-16 |
| Medicago truncatula | chr2 | 6 | CH_mtr_398 | 6 | 15 | 0.00000000222078 |
| Prunus persica | Pp06 | 6 | CH_ppe_556 | 4 | 16 | 0.0000533323 |
| Striga asiatica | scaffold75 | 6 | CH_sas_127 | 3 | 3 | 0.0000536142 |
| Simmondsia chinensis | GWHAASQ00000006 | 6 | CH_sci_268 | 4 | 14 | 0.0000850589 |
| Selenicereus undatus | Scaffold_33675 | 6 | CH_sun_163 | 3 | 5 | 0.0000645725 |
| Trochodendron aralioides | group7 | 6 | CH_tar_352 | 5 | 15 | 0.00000144505 |
| Theobroma cacao | Chromosome_9 | 6 | CH_tca_765 | 3 | 7 | 0.000821433 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |