Functional clusters
Information
- Type InterPro
- Description Expansin/pollen allergen, DPBB domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 5 | CH_arhy_369 | 5 | 7 | 0.00000000131696 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1280 | 5 | CH_cqu_791 | 3 | 3 | 0.000184347 |
| Lotus japonicus | chr1 | 5 | CH_lja_74 | 5 | 5 | 0.0000000000636734 |
| Medicago truncatula | chr2 | 5 | CH_mtr_984 | 3 | 4 | 0.0000605801 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_2345 | 3 | 3 | 0.000303725 |
| Schrenkiella parvula | ch7-1 | 5 | CH_spa_353 | 3 | 6 | 0.000753179 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 6 | CH_arhy_369 | 5 | 7 | 0.00000000131696 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1280 | 6 | CH_cqu_791 | 3 | 3 | 0.000184347 |
| Lotus japonicus | chr1 | 6 | CH_lja_74 | 5 | 5 | 0.0000000000636734 |
| Medicago truncatula | chr2 | 6 | CH_mtr_984 | 3 | 4 | 0.0000605801 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_2345 | 3 | 3 | 0.000303725 |
| Schrenkiella parvula | ch7-1 | 6 | CH_spa_353 | 3 | 6 | 0.000753179 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |