Functional clusters
Information
- Type InterPro
- Description Stigma-specific protein Stig1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR01 | 5 | CH_aox_203 | 3 | 3 | 0.00000159195 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 5 | CH_arhy_536 | 3 | 3 | 0.000000295785 |
| Brassica carinata | ChrB08 | 5 | CH_bca_1175 | 3 | 6 | 0.0000277315 |
| Brassica carinata | ChrC01 | 5 | CH_bca_794 | 3 | 3 | 0.00000138732 |
| Brassica oleracea | C8 | 5 | CH_bol_416 | 3 | 6 | 0.00000704877 |
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 5 | CH_bvu_423 | 2 | 2 | 0.000248375 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_612 | 2 | 2 | 0.000984963 |
| Corylus avellana | 2 | 5 | CH_cav_406 | 3 | 6 | 0.0000148043 |
| Citrus clementina | scaffold_1 | 5 | CH_ccl_330 | 4 | 15 | 0.000000284206 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_363 | 3 | 3 | 0.000000847901 |
| Carpinus fangiana | Cfa01 | 5 | CH_cfa_132 | 4 | 4 | 0.000000000091233 |
| Carya illinoinensis | Chr09 | 5 | CH_cil_116 | 5 | 6 | 0.0000000000000511528 |
| Citrullus lanatus | CG_Chr03 | 5 | CH_cla_167 | 3 | 10 | 0.0000141551 |
| Carica papaya | supercontig_12 | 5 | CH_cpa_199 | 4 | 28 | 0.0000018402 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1373 | 5 | CH_cqu_174 | 4 | 5 | 0.000000000111692 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 5 | CH_cqu_403 | 3 | 4 | 0.000000754275 |
| Cucumis sativus L. | chr1 | 5 | CH_csa_313 | 3 | 15 | 0.0000475006 |
| Davidia involucrata | GWHABJS00000020 | 5 | CH_din_185 | 4 | 8 | 0.00000000551385 |
| Durio zibethinus | NW_019167982.1 | 5 | CH_dzi_113 | 4 | 5 | 0.000000000492818 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_732 | 3 | 3 | 0.000000179842 |
| Fragaria vesca | Fvb3 | 5 | CH_fve_197 | 4 | 5 | 0.00000000064394 |
| Gossypium hirsutum | A05 | 5 | CH_ghi_332 | 4 | 4 | 0.00000000100236 |
| Gossypium hirsutum | D05 | 5 | CH_ghi_333 | 4 | 4 | 0.00000000100236 |
| Gossypium hirsutum | A04 | 5 | CH_ghi_380 | 4 | 5 | 0.00000000501052 |
| Gossypium hirsutum | A01 | 5 | CH_ghi_473 | 4 | 9 | 0.000000126134 |
| Gossypium hirsutum | D01 | 5 | CH_ghi_518 | 4 | 11 | 0.000000330181 |
| Gossypium hirsutum | D05 | 5 | CH_ghi_638 | 3 | 3 | 0.00000312821 |
| Gossypium raimondii | Chr09 | 5 | CH_gra_114 | 5 | 5 | 0.000000000000270657 |
| Gossypium raimondii | Chr09 | 5 | CH_gra_125 | 5 | 6 | 0.0000000000016235 |
| Gossypium raimondii | Chr02 | 5 | CH_gra_269 | 4 | 11 | 0.000000277097 |
| Helianthus annuus | HanXRQChr15 | 5 | CH_han_286 | 4 | 5 | 0.000000000618816 |
| Hydrangea macrophylla | Hma1.2p1_0298F.1 | 5 | CH_hma_352 | 2 | 2 | 0.000111086 |
| Lotus japonicus | chr6 | 5 | CH_lja_249 | 3 | 3 | 0.000000920437 |
| Lotus japonicus | chr6 | 5 | CH_lja_371 | 4 | 46 | 0.0000372684 |
| Lonicera japonica | GWHAAZE00000006 | 5 | CH_lonja_116 | 6 | 6 | 1.45636e-18 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_261 | 5 | 26 | 0.00000000441446 |
| Malus domestica | Chr10 | 5 | CH_mdo_117 | 5 | 5 | 0.0000000000000465793 |
| Malus domestica | Chr11 | 5 | CH_mdo_1438 | 3 | 18 | 0.000798599 |
| Malus domestica | Chr05 | 5 | CH_mdo_575 | 3 | 3 | 0.000000981464 |
| Manihot esculenta | Chromosome15 | 5 | CH_mes_284 | 4 | 11 | 0.000000111411 |
| Manihot esculenta | Chromosome03 | 5 | CH_mes_350 | 3 | 3 | 0.00000123051 |
| Manihot esculenta | Chromosome16 | 5 | CH_mes_351 | 3 | 3 | 0.00000123051 |
| Marchantia polymorpha | scaffold_48 | 5 | CH_mpo_115 | 3 | 3 | 0.0000149306 |
| Marchantia polymorpha | scaffold_117 | 5 | CH_mpo_2 | 9 | 9 | 1.5279e-24 |
| Medicago truncatula | chr7 | 5 | CH_mtr_721 | 3 | 3 | 0.00000206626 |
| Medicago truncatula | chr2 | 5 | CH_mtr_722 | 3 | 3 | 0.00000206626 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_53 | 5 | 5 | 0.000000000000080842 |
| Nicotiana tabacum | Nitab4.5_0001409 | 5 | CH_nta_202 | 2 | 2 | 0.000109727 |
| Prunus persica | Pp04 | 5 | CH_ppe_154 | 5 | 5 | 0.00000000000069756 |
| Prunus persica | Pp04 | 5 | CH_ppe_511 | 3 | 4 | 0.0000151863 |
| Pisum sativum | chr1LG6 | 5 | CH_psa_195 | 3 | 3 | 0.0000000408165 |
| Populus trichocarpa | Chr04 | 5 | CH_ptr_132 | 5 | 5 | 0.00000000000071735 |
| Populus trichocarpa | Chr11 | 5 | CH_ptr_257 | 4 | 5 | 0.00000000886102 |
| Quercus lobata | 5 | 5 | CH_qlo_475 | 4 | 4 | 0.0000000000289022 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_164 | 6 | 10 | 8.16086e-16 |
| Rhododendron simsii | chr13 | 5 | CH_rsi_159 | 5 | 6 | 0.0000000000000983268 |
| Striga asiatica | scaffold196 | 5 | CH_sas_255 | 2 | 2 | 0.000938057 |
| Salix brachista | GWHAAZH00000004 | 5 | CH_sbr_102 | 5 | 5 | 0.000000000000731881 |
| Simmondsia chinensis | GWHAASQ00000005 | 5 | CH_sci_455 | 2 | 2 | 0.000510856 |
| Sechium edule | LG01 | 5 | CH_sed_111 | 4 | 9 | 0.00000000480151 |
| Solanum lycopersicum | SL4.0ch02 | 5 | CH_sly_558 | 3 | 9 | 0.0000520325 |
| Theobroma cacao | Chromosome_6 | 5 | CH_tca_137 | 5 | 8 | 0.0000000000030441 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 5 | CH_tpr_398 | 3 | 5 | 0.000014175 |
| Utricularia gibba | unitig_37 | 5 | CH_ugi_74 | 3 | 4 | 0.00000226156 |
| Vigna mungo | CM024075.1 | 5 | CH_vmu_634 | 2 | 2 | 0.000969211 |
| Aquilegia oxysepala | CHR01 | 6 | CH_aox_203 | 3 | 3 | 0.00000159195 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 6 | CH_arhy_536 | 3 | 3 | 0.000000295785 |
| Brassica carinata | ChrB08 | 6 | CH_bca_1175 | 3 | 6 | 0.0000277315 |
| Brassica carinata | ChrC01 | 6 | CH_bca_794 | 3 | 3 | 0.00000138732 |
| Brassica oleracea | C8 | 6 | CH_bol_416 | 3 | 6 | 0.00000704877 |
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 6 | CH_bvu_423 | 2 | 2 | 0.000248375 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_612 | 2 | 2 | 0.000984963 |
| Corylus avellana | 2 | 6 | CH_cav_406 | 3 | 6 | 0.0000148043 |
| Citrus clementina | scaffold_1 | 6 | CH_ccl_330 | 4 | 15 | 0.000000284206 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_363 | 3 | 3 | 0.000000847901 |
| Carpinus fangiana | Cfa01 | 6 | CH_cfa_132 | 4 | 4 | 0.000000000091233 |
| Carya illinoinensis | Chr09 | 6 | CH_cil_116 | 5 | 6 | 0.0000000000000511528 |
| Citrullus lanatus | CG_Chr03 | 6 | CH_cla_167 | 3 | 10 | 0.0000141551 |
| Cucumis melo | chr12 | 6 | CH_cme_247 | 3 | 11 | 0.0000110077 |
| Carica papaya | supercontig_12 | 6 | CH_cpa_199 | 4 | 28 | 0.0000018402 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1373 | 6 | CH_cqu_174 | 4 | 5 | 0.000000000111692 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 6 | CH_cqu_403 | 3 | 4 | 0.000000754275 |
| Cucumis sativus L. | chr1 | 6 | CH_csa_313 | 3 | 15 | 0.0000475006 |
| Davidia involucrata | GWHABJS00000020 | 6 | CH_din_185 | 4 | 8 | 0.00000000551385 |
| Durio zibethinus | NW_019167982.1 | 6 | CH_dzi_113 | 4 | 5 | 0.000000000492818 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_732 | 3 | 3 | 0.000000179842 |
| Fragaria x ananassa | Fvb3-1 | 6 | CH_fan_505 | 3 | 4 | 0.00000234163 |
| Fragaria vesca | Fvb3 | 6 | CH_fve_197 | 4 | 5 | 0.00000000064394 |
| Gossypium hirsutum | A05 | 6 | CH_ghi_332 | 4 | 4 | 0.00000000100236 |
| Gossypium hirsutum | D05 | 6 | CH_ghi_333 | 4 | 4 | 0.00000000100236 |
| Gossypium hirsutum | A04 | 6 | CH_ghi_380 | 4 | 5 | 0.00000000501052 |
| Gossypium hirsutum | A01 | 6 | CH_ghi_473 | 4 | 9 | 0.000000126134 |
| Gossypium hirsutum | D01 | 6 | CH_ghi_518 | 4 | 11 | 0.000000330181 |
| Gossypium hirsutum | D05 | 6 | CH_ghi_638 | 3 | 3 | 0.00000312821 |
| Gossypium raimondii | Chr09 | 6 | CH_gra_114 | 5 | 5 | 0.000000000000270657 |
| Gossypium raimondii | Chr09 | 6 | CH_gra_125 | 5 | 6 | 0.0000000000016235 |
| Gossypium raimondii | Chr02 | 6 | CH_gra_269 | 4 | 11 | 0.000000277097 |
| Helianthus annuus | HanXRQChr15 | 6 | CH_han_286 | 4 | 5 | 0.000000000618816 |
| Hydrangea macrophylla | Hma1.2p1_0298F.1 | 6 | CH_hma_352 | 2 | 2 | 0.000111086 |
| Lotus japonicus | chr6 | 6 | CH_lja_249 | 3 | 3 | 0.000000920437 |
| Lotus japonicus | chr6 | 6 | CH_lja_371 | 4 | 46 | 0.0000372684 |
| Lonicera japonica | GWHAAZE00000006 | 6 | CH_lonja_116 | 6 | 6 | 1.45636e-18 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_261 | 5 | 26 | 0.00000000441446 |
| Malus domestica | Chr10 | 6 | CH_mdo_117 | 5 | 5 | 0.0000000000000465793 |
| Malus domestica | Chr11 | 6 | CH_mdo_1438 | 3 | 18 | 0.000798599 |
| Malus domestica | Chr05 | 6 | CH_mdo_575 | 3 | 3 | 0.000000981464 |
| Manihot esculenta | Chromosome15 | 6 | CH_mes_284 | 4 | 11 | 0.000000111411 |
| Manihot esculenta | Chromosome03 | 6 | CH_mes_350 | 3 | 3 | 0.00000123051 |
| Manihot esculenta | Chromosome16 | 6 | CH_mes_351 | 3 | 3 | 0.00000123051 |
| Marchantia polymorpha | scaffold_48 | 6 | CH_mpo_115 | 3 | 3 | 0.0000149306 |
| Marchantia polymorpha | scaffold_117 | 6 | CH_mpo_2 | 9 | 9 | 1.5279e-24 |
| Medicago truncatula | chr7 | 6 | CH_mtr_721 | 3 | 3 | 0.00000206626 |
| Medicago truncatula | chr2 | 6 | CH_mtr_722 | 3 | 3 | 0.00000206626 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_53 | 5 | 5 | 0.000000000000080842 |
| Nicotiana tabacum | Nitab4.5_0001409 | 6 | CH_nta_202 | 2 | 2 | 0.000109727 |
| Prunus persica | Pp04 | 6 | CH_ppe_154 | 5 | 5 | 0.00000000000069756 |
| Prunus persica | Pp04 | 6 | CH_ppe_511 | 3 | 4 | 0.0000151863 |
| Pisum sativum | chr1LG6 | 6 | CH_psa_195 | 3 | 3 | 0.0000000408165 |
| Populus trichocarpa | Chr04 | 6 | CH_ptr_132 | 5 | 5 | 0.00000000000071735 |
| Populus trichocarpa | Chr11 | 6 | CH_ptr_257 | 4 | 5 | 0.00000000886102 |
| Quercus lobata | 5 | 6 | CH_qlo_475 | 4 | 4 | 0.0000000000289022 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_164 | 6 | 10 | 8.16086e-16 |
| Rhododendron simsii | chr13 | 6 | CH_rsi_159 | 5 | 6 | 0.0000000000000983268 |
| Striga asiatica | scaffold196 | 6 | CH_sas_255 | 2 | 2 | 0.000938057 |
| Salix brachista | GWHAAZH00000004 | 6 | CH_sbr_102 | 5 | 5 | 0.000000000000731881 |
| Simmondsia chinensis | GWHAASQ00000005 | 6 | CH_sci_455 | 2 | 2 | 0.000510856 |
| Sechium edule | LG01 | 6 | CH_sed_111 | 4 | 9 | 0.00000000480151 |
| Solanum lycopersicum | SL4.0ch02 | 6 | CH_sly_558 | 3 | 9 | 0.0000520325 |
| Theobroma cacao | Chromosome_6 | 6 | CH_tca_137 | 5 | 8 | 0.0000000000030441 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 6 | CH_tpr_398 | 3 | 5 | 0.000014175 |
| Utricularia gibba | unitig_37 | 6 | CH_ugi_74 | 3 | 4 | 0.00000226156 |
| Vigna mungo | CM024075.1 | 6 | CH_vmu_634 | 2 | 2 | 0.000969211 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |