Functional clusters
Information
- Type InterPro
- Description Root UVB sensitive family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr11 | 5 | CH_acertr_651 | 3 | 9 | 0.0000750472 |
| Actinidia chinensis | Lachesis_group21 | 5 | CH_ach_143 | 3 | 3 | 0.000000531158 |
| Citrullus lanatus | CG_Chr05 | 5 | CH_cla_168 | 3 | 5 | 0.0000141583 |
| Hydrangea macrophylla | Hma1.2p1_0199F.1 | 5 | CH_hma_61 | 4 | 4 | 0.000000000518259 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_607 | 3 | 3 | 0.000000200248 |
| Rhododendron simsii | chr11 | 5 | CH_rsi_343 | 4 | 7 | 0.000000013958 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1340 | 3 | 3 | 0.00000199351 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_1341 | 3 | 3 | 0.00000199351 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_713 | 4 | 4 | 0.000000000631272 |
| Sapria himalayana | scaffold4_21100006 | 5 | CH_shi_192 | 3 | 5 | 0.000000980726 |
| Selenicereus undatus | Scaffold_10417 | 5 | CH_sun_236 | 3 | 20 | 0.000180222 |
| Acer truncatum | chr11 | 6 | CH_acertr_651 | 3 | 9 | 0.0000750472 |
| Actinidia chinensis | Lachesis_group21 | 6 | CH_ach_143 | 3 | 3 | 0.000000531158 |
| Citrullus lanatus | CG_Chr05 | 6 | CH_cla_168 | 3 | 5 | 0.0000141583 |
| Hydrangea macrophylla | Hma1.2p1_0199F.1 | 6 | CH_hma_61 | 4 | 4 | 0.000000000518259 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_607 | 3 | 3 | 0.000000200248 |
| Rhododendron simsii | chr11 | 6 | CH_rsi_343 | 4 | 7 | 0.000000013958 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1340 | 3 | 3 | 0.00000199351 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_1341 | 3 | 3 | 0.00000199351 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_713 | 4 | 4 | 0.000000000631272 |
| Sapria himalayana | scaffold4_21100006 | 6 | CH_shi_192 | 3 | 5 | 0.000000980726 |
| Selenicereus undatus | Scaffold_10417 | 6 | CH_sun_236 | 3 | 20 | 0.000180222 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |