Functional clusters

Information

  • Type InterPro
  • Description Alliinase, EGF-like domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 5 CH_aly_710 2 6 0.000989936
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_1018 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 5 CH_arhy_1019 2 2 0.00017963
Camellia sinensis var. sinensis Chr4 5 CH_camsi_510 3 5 0.000000126152
Cannabis sativa NC_044370.1 5 CH_cansat_188 3 5 0.0000000646747
Cardamine hirsuta Chr1 5 CH_chi_78 5 8 0.00000000000000958783
Carya illinoinensis Chr07 5 CH_cil_566 2 2 0.0000619828
Capsella rubella scaffold_1 5 CH_cru_572 2 4 0.000438661
Eucalyptus grandis Chr06 5 CH_egr_636 3 4 0.0000000205528
Lactuca sativa Lsat_1_v8_lg_9 5 CH_lsa_608 2 2 0.0000514007
Oryza sativa ssp. japonica chr01 5 CH_osa_708 2 5 0.000528081
Petunia axillaris Peaxi162Scf00297 5 CH_pax_626 2 2 0.000422134
Populus trichocarpa Chr02 5 CH_ptr_598 2 3 0.000173395
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1084 2 3 0.000119593
Rhododendron simsii chr11 5 CH_rsi_672 2 2 0.0000645307
Schrenkiella parvula ch1-1 5 CH_spa_276 2 3 0.000236193
Theobroma cacao Chromosome_8 5 CH_tca_245 3 3 0.00000000804614
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_443 2 2 0.0000929238
Zea mays 3 5 CH_zma_333 2 2 0.0000511313
Arabidopsis lyrata scaffold_1 6 CH_aly_710 2 6 0.000989936
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_1018 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 6 CH_arhy_1019 2 2 0.00017963
Camellia sinensis var. sinensis Chr4 6 CH_camsi_510 3 5 0.000000126152
Cannabis sativa NC_044370.1 6 CH_cansat_188 3 5 0.0000000646747
Cardamine hirsuta Chr1 6 CH_chi_78 5 8 0.00000000000000958783
Carya illinoinensis Chr07 6 CH_cil_566 2 2 0.0000619828
Capsella rubella scaffold_1 6 CH_cru_572 2 4 0.000438661
Eucalyptus grandis Chr06 6 CH_egr_636 3 4 0.0000000205528
Lactuca sativa Lsat_1_v8_lg_9 6 CH_lsa_608 2 2 0.0000514007
Oryza sativa ssp. japonica chr01 6 CH_osa_708 2 5 0.000528081
Petunia axillaris Peaxi162Scf00297 6 CH_pax_626 2 2 0.000422134
Populus trichocarpa Chr02 6 CH_ptr_598 2 3 0.000173395
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1084 2 3 0.000119593
Rhododendron simsii chr11 6 CH_rsi_672 2 2 0.0000645307
Schrenkiella parvula ch1-1 6 CH_spa_276 2 3 0.000236193
Theobroma cacao Chromosome_8 6 CH_tca_245 3 3 0.00000000804614
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_443 2 2 0.0000929238
Zea mays 3 6 CH_zma_333 2 2 0.0000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001