Functional clusters
Information
- Type InterPro
- Description Domain of unknown function DUF642
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR02 | 5 | CH_aox_552 | 2 | 2 | 0.000801989 |
| Amborella trichopoda | AmTr_v1.0_scaffold00141 | 5 | CH_atr_173 | 4 | 13 | 0.0000000161174 |
| Brassica carinata | ChrB07 | 5 | CH_bca_914 | 3 | 3 | 0.00000339976 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 5 | CH_bvu_117 | 4 | 6 | 0.00000000178721 |
| Camellia sinensis var. sinensis | Chr2 | 5 | CH_camsi_827 | 3 | 7 | 0.0000132394 |
| Coffea canephora | chr4 | 5 | CH_ccan_678 | 2 | 6 | 0.000638821 |
| Cardamine hirsuta | Chr6 | 5 | CH_chi_422 | 3 | 5 | 0.0000204847 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2876 | 5 | CH_cqu_215 | 4 | 4 | 0.000000000759579 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3792 | 5 | CH_cqu_468 | 3 | 3 | 0.00000229002 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2939 | 5 | CH_cqu_469 | 3 | 3 | 0.00000229002 |
| Erythranthe guttata | scaffold_11 | 5 | CH_egut_137 | 5 | 7 | 0.00000000000569622 |
| Eutrema salsugineum | scaffold_10 | 5 | CH_esa_212 | 3 | 3 | 0.00000143526 |
| Lactuca sativa | Lsat_1_v8_lg_0 | 5 | CH_lsa_415 | 3 | 3 | 0.000000871892 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 5 | CH_lsa_515 | 3 | 5 | 0.00000871545 |
| Malus domestica | Chr17 | 5 | CH_mdo_634 | 3 | 4 | 0.00000246728 |
| Medicago truncatula | chr4 | 5 | CH_mtr_517 | 3 | 3 | 0.0000000506436 |
| Olea europaea | chr3 | 5 | CH_oeu_648 | 3 | 14 | 0.000705796 |
| Oryza sativa ssp. japonica | chr04 | 5 | CH_osa_82 | 5 | 6 | 0.0000000000000462162 |
| Physcomitrium patens | Chr12 | 5 | CH_ppa_364 | 2 | 2 | 0.000612726 |
| Papaver somniferum | NW_020634374.1 | 5 | CH_pso_559 | 4 | 12 | 0.000000693389 |
| Papaver somniferum | NC_039360.1 | 5 | CH_pso_672 | 3 | 3 | 0.00000415402 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_1395 | 2 | 2 | 0.000597979 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_1377 | 3 | 3 | 0.00000344948 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_710 | 5 | 13 | 0.000000000630655 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_735 | 4 | 4 | 0.0000000013444 |
| Trochodendron aralioides | group7 | 5 | CH_tar_951 | 2 | 2 | 0.000900549 |
| Zea mays | 2 | 5 | CH_zma_27 | 6 | 6 | 7.26773e-18 |
| Aquilegia oxysepala | CHR02 | 6 | CH_aox_552 | 2 | 2 | 0.000801989 |
| Amborella trichopoda | AmTr_v1.0_scaffold00141 | 6 | CH_atr_173 | 4 | 13 | 0.0000000161174 |
| Brassica carinata | ChrB07 | 6 | CH_bca_914 | 3 | 3 | 0.00000339976 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 6 | CH_bvu_117 | 4 | 6 | 0.00000000178721 |
| Camellia sinensis var. sinensis | Chr2 | 6 | CH_camsi_827 | 3 | 7 | 0.0000132394 |
| Coffea canephora | chr4 | 6 | CH_ccan_678 | 2 | 6 | 0.000638821 |
| Cardamine hirsuta | Chr6 | 6 | CH_chi_422 | 3 | 5 | 0.0000204847 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2876 | 6 | CH_cqu_215 | 4 | 4 | 0.000000000759579 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3792 | 6 | CH_cqu_468 | 3 | 3 | 0.00000229002 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2939 | 6 | CH_cqu_469 | 3 | 3 | 0.00000229002 |
| Erythranthe guttata | scaffold_11 | 6 | CH_egut_137 | 5 | 7 | 0.00000000000569622 |
| Eutrema salsugineum | scaffold_10 | 6 | CH_esa_212 | 3 | 3 | 0.00000143526 |
| Lactuca sativa | Lsat_1_v8_lg_0 | 6 | CH_lsa_415 | 3 | 3 | 0.000000871892 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 6 | CH_lsa_515 | 3 | 5 | 0.00000871545 |
| Malus domestica | Chr17 | 6 | CH_mdo_634 | 3 | 4 | 0.00000246728 |
| Medicago truncatula | chr4 | 6 | CH_mtr_517 | 3 | 3 | 0.0000000506436 |
| Olea europaea | chr3 | 6 | CH_oeu_648 | 3 | 14 | 0.000705796 |
| Oryza sativa ssp. japonica | chr04 | 6 | CH_osa_82 | 5 | 6 | 0.0000000000000462162 |
| Physcomitrium patens | Chr12 | 6 | CH_ppa_364 | 2 | 2 | 0.000612726 |
| Papaver somniferum | NW_020634374.1 | 6 | CH_pso_559 | 4 | 12 | 0.000000693389 |
| Papaver somniferum | NC_039360.1 | 6 | CH_pso_672 | 3 | 3 | 0.00000415402 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_1395 | 2 | 2 | 0.000597979 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_1377 | 3 | 3 | 0.00000344948 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_710 | 5 | 13 | 0.000000000630655 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_735 | 4 | 4 | 0.0000000013444 |
| Trochodendron aralioides | group7 | 6 | CH_tar_951 | 2 | 2 | 0.000900549 |
| Zea mays | 2 | 6 | CH_zma_27 | 6 | 6 | 7.26773e-18 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |