Functional clusters

Information

  • Type InterPro
  • Description CENP-V/GFA domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_14204_HRSCAF_14270 5 CH_ama_186 2 4 0.000517286
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 5 CH_amhyb_222 2 2 0.0000841751
Citrus clementina scaffold_6 5 CH_ccl_524 2 2 0.0000820311
Carpinus fangiana Cfa03 5 CH_cfa_270 3 3 0.00000072273
Carya illinoinensis Chr03 5 CH_cil_565 2 2 0.0000619828
Chenopodium quinoa C_Quinoa_Scaffold_1001 5 CH_cqu_837 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2193 5 CH_cqu_838 2 2 0.000284293
Eucalyptus grandis Chr06 5 CH_egr_1063 2 2 0.0000585274
Gossypium hirsutum A08 5 CH_ghi_953 2 2 0.000160209
Glycine max Gm18 5 CH_gma_636 2 2 0.000113867
Gossypium raimondii Chr04 5 CH_gra_201 3 3 0.00000000431127
Lonicera japonica GWHAAZE00000002 5 CH_lonja_739 2 2 0.0000598874
Malus domestica Chr17 5 CH_mdo_1181 2 3 0.00034128
Olea europaea chr18 5 CH_oeu_323 2 2 0.0000533789
Petunia axillaris Peaxi162Scf00464 5 CH_pax_413 2 2 0.0000703556
Pisum sativum chr5LG3 5 CH_psa_148 3 3 0.00000000408165
Populus trichocarpa Chr17 5 CH_ptr_298 3 5 0.0000000501114
Quercus lobata CM012294 5 CH_qlo_1243 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_429 4 25 0.00000000240344
Avicennia marina ScioBoG_14204_HRSCAF_14270 6 CH_ama_186 2 4 0.000517286
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 6 CH_amhyb_222 2 2 0.0000841751
Citrus clementina scaffold_6 6 CH_ccl_524 2 2 0.0000820311
Carpinus fangiana Cfa03 6 CH_cfa_270 3 3 0.00000072273
Carya illinoinensis Chr03 6 CH_cil_565 2 2 0.0000619828
Chenopodium quinoa C_Quinoa_Scaffold_1001 6 CH_cqu_837 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2193 6 CH_cqu_838 2 2 0.000284293
Eucalyptus grandis Chr06 6 CH_egr_1063 2 2 0.0000585274
Gossypium hirsutum A08 6 CH_ghi_953 2 2 0.000160209
Glycine max Gm18 6 CH_gma_636 2 2 0.000113867
Gossypium raimondii Chr04 6 CH_gra_201 3 3 0.00000000431127
Lonicera japonica GWHAAZE00000002 6 CH_lonja_739 2 2 0.0000598874
Malus domestica Chr17 6 CH_mdo_1181 2 3 0.00034128
Olea europaea chr18 6 CH_oeu_323 2 2 0.0000533789
Petunia axillaris Peaxi162Scf00464 6 CH_pax_413 2 2 0.0000703556
Pisum sativum chr5LG3 6 CH_psa_148 3 3 0.00000000408165
Populus trichocarpa Chr17 6 CH_ptr_298 3 5 0.0000000501114
Quercus lobata CM012294 6 CH_qlo_1243 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_429 4 25 0.00000000240344

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001