Functional clusters
Information
- Type InterPro
- Description Protein of unknown function DUF716
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_607 | 2 | 2 | 0.000601633 |
| Brassica carinata | ChrC01 | 5 | CH_bca_866 | 4 | 28 | 0.00000231793 |
| Brassica napus | C03 | 5 | CH_bna_839 | 3 | 7 | 0.0000147533 |
| Brassica oleracea | C3 | 5 | CH_bol_490 | 3 | 10 | 0.000023061 |
| Coffea canephora | chr1 | 5 | CH_ccan_588 | 3 | 79 | 0.000354602 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_684 | 3 | 18 | 0.000459912 |
| Carya illinoinensis | Chr14 | 5 | CH_cil_421 | 3 | 3 | 0.00000164821 |
| Carya illinoinensis | Chr13 | 5 | CH_cil_530 | 3 | 6 | 0.0000329382 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 5 | CH_eca_760 | 2 | 2 | 0.000448722 |
| Eutrema salsugineum | scaffold_7 | 5 | CH_esa_219 | 3 | 4 | 0.00000194812 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_240 | 5 | 10 | 0.00000000000612275 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 5 | CH_lsa_232 | 4 | 6 | 0.00000000128305 |
| Manihot esculenta | Chromosome03 | 5 | CH_mes_336 | 3 | 3 | 0.000000922882 |
| Petunia axillaris | Peaxi162Scf00100 | 5 | CH_pax_107 | 5 | 20 | 0.000000000358236 |
| Punica granatum | NC_045129.1 | 5 | CH_pgr_267 | 3 | 3 | 0.00000070945 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_184 | 8 | 70 | 0.00000000000000814778 |
| Salvia bowleyana | GWHASIU00000002 | 5 | CH_sbo_360 | 3 | 4 | 0.00000149027 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_1258 | 3 | 4 | 0.00000079731 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 5 | CH_tpr_245 | 3 | 3 | 0.000000481346 |
| Tripterygium wilfordii | NC_052246.1 | 5 | CH_twi_41 | 5 | 5 | 0.0000000000000573931 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_607 | 2 | 2 | 0.000601633 |
| Brassica carinata | ChrC01 | 6 | CH_bca_866 | 4 | 28 | 0.00000231793 |
| Brassica napus | C03 | 6 | CH_bna_839 | 3 | 7 | 0.0000147533 |
| Brassica oleracea | C3 | 6 | CH_bol_490 | 3 | 10 | 0.000023061 |
| Coffea canephora | chr1 | 6 | CH_ccan_588 | 3 | 79 | 0.000354602 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_684 | 3 | 18 | 0.000459912 |
| Carya illinoinensis | Chr14 | 6 | CH_cil_421 | 3 | 3 | 0.00000164821 |
| Carya illinoinensis | Chr13 | 6 | CH_cil_530 | 3 | 6 | 0.0000329382 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 6 | CH_eca_760 | 2 | 2 | 0.000448722 |
| Eutrema salsugineum | scaffold_7 | 6 | CH_esa_219 | 3 | 4 | 0.00000194812 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_240 | 5 | 10 | 0.00000000000612275 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 6 | CH_lsa_232 | 4 | 6 | 0.00000000128305 |
| Manihot esculenta | Chromosome03 | 6 | CH_mes_336 | 3 | 3 | 0.000000922882 |
| Petunia axillaris | Peaxi162Scf00100 | 6 | CH_pax_107 | 5 | 20 | 0.000000000358236 |
| Punica granatum | NC_045129.1 | 6 | CH_pgr_267 | 3 | 3 | 0.00000070945 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_184 | 8 | 70 | 0.00000000000000814778 |
| Salvia bowleyana | GWHASIU00000002 | 6 | CH_sbo_360 | 3 | 4 | 0.00000149027 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_1258 | 3 | 4 | 0.00000079731 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 6 | CH_tpr_245 | 3 | 3 | 0.000000481346 |
| Tripterygium wilfordii | NC_052246.1 | 6 | CH_twi_41 | 5 | 5 | 0.0000000000000573931 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |