Functional clusters

Information

  • Type InterPro
  • Description LMBR1-like membrane protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00034 5 CH_atr_575 2 2 0.000476644
Coffea canephora chr2 5 CH_ccan_442 2 4 0.00007666
Cardamine hirsuta Chr8 5 CH_chi_705 2 2 0.000414723
Hydrangea macrophylla Hma1.2p1_0784F.1 5 CH_hma_637 2 2 0.000666519
Olea europaea chr20 5 CH_oeu_530 2 2 0.000320273
Sequoiadendron giganteum chr9 5 CH_sgi_2379 2 3 0.000438418
Selaginella moellendorffii scaffold_21 5 CH_smo_132 3 4 0.00000292876
Selaginella moellendorffii scaffold_31 5 CH_smo_133 3 4 0.00000292876
Selenicereus undatus Scaffold_33677 5 CH_sun_331 2 2 0.000435983
Amborella trichopoda AmTr_v1.0_scaffold00034 6 CH_atr_575 2 2 0.000476644
Coffea canephora chr2 6 CH_ccan_442 2 4 0.00007666
Cardamine hirsuta Chr8 6 CH_chi_705 2 2 0.000414723
Hydrangea macrophylla Hma1.2p1_0784F.1 6 CH_hma_637 2 2 0.000666519
Olea europaea chr20 6 CH_oeu_530 2 2 0.000320273
Sequoiadendron giganteum chr9 6 CH_sgi_2379 2 3 0.000438418
Selaginella moellendorffii scaffold_21 6 CH_smo_132 3 4 0.00000292876
Selaginella moellendorffii scaffold_31 6 CH_smo_133 3 4 0.00000292876
Selenicereus undatus Scaffold_33677 6 CH_sun_331 2 2 0.000435983

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001