Functional clusters
Information
- Type InterPro
- Description Domain of unknown function DUF629
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group4 | 5 | CH_ach_601 | 2 | 2 | 0.000814819 |
| Arabidopsis lyrata | scaffold_4 | 5 | CH_aly_315 | 3 | 3 | 0.00000186904 |
| Aquilegia oxysepala | CHR04 | 5 | CH_aox_44 | 7 | 38 | 0.000000000000442763 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_242 | 4 | 16 | 0.000000304982 |
| Arabidopsis thaliana | Chr2 | 5 | CH_ath_393 | 3 | 8 | 0.0000468448 |
| Brassica napus | A02 | 5 | CH_bna_164 | 5 | 9 | 0.00000000000595632 |
| Brassica napus | C02 | 5 | CH_bna_406 | 4 | 10 | 0.000000050917 |
| Brassica rapa | A02 | 5 | CH_bra_280 | 3 | 6 | 0.00000911943 |
| Carpinus fangiana | Cfa04 | 5 | CH_cfa_190 | 5 | 47 | 0.0000000210821 |
| Cardamine hirsuta | Chr2 | 5 | CH_chi_120 | 6 | 16 | 0.0000000000109729 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_218 | 4 | 5 | 0.0000000239907 |
| Capsella rubella | scaffold_2 | 5 | CH_cru_148 | 5 | 10 | 0.000000000461884 |
| Capsella rubella | scaffold_4 | 5 | CH_cru_220 | 4 | 6 | 0.0000000537801 |
| Capsella rubella | scaffold_8 | 5 | CH_cru_351 | 3 | 3 | 0.00000654358 |
| Erythranthe guttata | scaffold_9 | 5 | CH_egut_497 | 2 | 2 | 0.0000728147 |
| Eutrema salsugineum | scaffold_6 | 5 | CH_esa_358 | 3 | 10 | 0.0000875528 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_219 | 4 | 6 | 0.000000000180401 |
| Oryza sativa ssp. japonica | chr11 | 5 | CH_osa_156 | 4 | 5 | 0.000000000278383 |
| Quercus lobata | 5 | 5 | CH_qlo_49 | 14 | 49 | 1.53996e-32 |
| Salix brachista | GWHAAZH00000016 | 5 | CH_sbr_512 | 3 | 22 | 0.000183098 |
| Tarenaya hassleriana | NW_010960187.1 | 5 | CH_tha_45 | 4 | 4 | 0.0000000000357832 |
| Vanilla planifolia | CM028161.1 | 5 | CH_vpl_466 | 3 | 46 | 0.000124118 |
| Vitis vinifera | chr14 | 5 | CH_vvi_604 | 2 | 2 | 0.000228189 |
| Actinidia chinensis | Lachesis_group4 | 6 | CH_ach_601 | 2 | 2 | 0.000814819 |
| Arabidopsis lyrata | scaffold_4 | 6 | CH_aly_315 | 3 | 3 | 0.00000186904 |
| Aquilegia oxysepala | CHR04 | 6 | CH_aox_44 | 7 | 38 | 0.000000000000442763 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_242 | 4 | 16 | 0.000000304982 |
| Arabidopsis thaliana | Chr2 | 6 | CH_ath_393 | 3 | 8 | 0.0000468448 |
| Brassica napus | A02 | 6 | CH_bna_164 | 5 | 9 | 0.00000000000595632 |
| Brassica napus | C02 | 6 | CH_bna_406 | 4 | 10 | 0.000000050917 |
| Brassica rapa | A02 | 6 | CH_bra_280 | 3 | 6 | 0.00000911943 |
| Carpinus fangiana | Cfa04 | 6 | CH_cfa_190 | 5 | 47 | 0.0000000210821 |
| Cardamine hirsuta | Chr2 | 6 | CH_chi_120 | 6 | 16 | 0.0000000000109729 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_218 | 4 | 5 | 0.0000000239907 |
| Capsella rubella | scaffold_2 | 6 | CH_cru_148 | 5 | 10 | 0.000000000461884 |
| Capsella rubella | scaffold_4 | 6 | CH_cru_220 | 4 | 6 | 0.0000000537801 |
| Capsella rubella | scaffold_8 | 6 | CH_cru_351 | 3 | 3 | 0.00000654358 |
| Erythranthe guttata | scaffold_9 | 6 | CH_egut_497 | 2 | 2 | 0.0000728147 |
| Eutrema salsugineum | scaffold_6 | 6 | CH_esa_358 | 3 | 10 | 0.0000875528 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_219 | 4 | 6 | 0.000000000180401 |
| Oryza sativa ssp. japonica | chr11 | 6 | CH_osa_156 | 4 | 5 | 0.000000000278383 |
| Quercus lobata | 5 | 6 | CH_qlo_49 | 14 | 49 | 1.53996e-32 |
| Salix brachista | GWHAAZH00000016 | 6 | CH_sbr_512 | 3 | 22 | 0.000183098 |
| Tarenaya hassleriana | NW_010960187.1 | 6 | CH_tha_45 | 4 | 4 | 0.0000000000357832 |
| Vanilla planifolia | CM028161.1 | 6 | CH_vpl_466 | 3 | 46 | 0.000124118 |
| Vitis vinifera | chr14 | 6 | CH_vvi_604 | 2 | 2 | 0.000228189 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |