Functional clusters
Information
- Type InterPro
- Description AIG1-type guanine nucleotide-binding (G) domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-6 | 5 | CH_aar_119 | 4 | 6 | 0.0000000112713 |
| Arabidopsis lyrata | scaffold_6 | 5 | CH_aly_207 | 4 | 5 | 0.0000000545367 |
| Arabidopsis lyrata | scaffold_1 | 5 | CH_aly_30 | 8 | 11 | 3.06528e-19 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_27 | 10 | 69 | 3.54807e-20 |
| Brassica carinata | ChrC04 | 5 | CH_bca_1235 | 3 | 6 | 0.0000448813 |
| Brassica napus | C09 | 5 | CH_bna_1070 | 3 | 6 | 0.000110093 |
| Capsicum annuum | PGAv.1.6.scaffold100 | 5 | CH_can_221 | 4 | 5 | 0.00000000418527 |
| Capsicum annuum | PGAv.1.6.scaffold308 | 5 | CH_can_319 | 4 | 11 | 0.000000275721 |
| Coffea canephora | chr10 | 5 | CH_ccan_101 | 4 | 35 | 0.000000000800073 |
| Citrus clementina | scaffold_3 | 5 | CH_ccl_8 | 18 | 25 | 3.80585e-47 |
| Carpinus fangiana | Cfa03 | 5 | CH_cfa_237 | 3 | 3 | 0.000000172079 |
| Cardamine hirsuta | Chr8 | 5 | CH_chi_393 | 3 | 3 | 0.00000817004 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_46 | 8 | 13 | 3.84451e-19 |
| Capsella rubella | scaffold_6 | 5 | CH_cru_105 | 5 | 5 | 0.00000000000332382 |
| Capsella rubella | scaffold_1 | 5 | CH_cru_68 | 6 | 6 | 0.00000000000000182293 |
| Cucumis sativus L. | chr3 | 5 | CH_csa_234 | 3 | 3 | 0.00000229961 |
| Cucumis sativus L. | chr5 | 5 | CH_csa_271 | 3 | 4 | 0.00000919547 |
| Erythranthe guttata | scaffold_12 | 5 | CH_egut_67 | 7 | 7 | 4.0645e-18 |
| Eutrema salsugineum | scaffold_5 | 5 | CH_esa_235 | 3 | 3 | 0.00000316627 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_379 | 4 | 6 | 0.0000000189846 |
| Helianthus annuus | HanXRQChr13 | 5 | CH_han_616 | 3 | 3 | 0.00000344952 |
| Medicago truncatula | chr4 | 5 | CH_mtr_443 | 4 | 9 | 0.00000000864629 |
| Prasinoderma coloniale | Chr21 | 5 | CH_pco_12 | 2 | 2 | 0.000837404 |
| Punica granatum | NC_045130.1 | 5 | CH_pgr_16 | 10 | 21 | 5.65554e-25 |
| Papaver somniferum | NW_020620714.1 | 5 | CH_pso_105 | 6 | 9 | 2.03593e-16 |
| Phaseolus vulgaris | Chr05 | 5 | CH_pvu_348 | 3 | 4 | 0.00000534308 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_74 | 11 | 67 | 3.80619e-23 |
| Salvia bowleyana | GWHASIU00000005 | 5 | CH_sbo_417 | 3 | 7 | 0.00000912463 |
| Sechium edule | LG04 | 5 | CH_sed_170 | 4 | 9 | 0.000000249358 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_55 | 13 | 26 | 7.65988e-35 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_270 | 4 | 9 | 0.0000000252003 |
| Schrenkiella parvula | ch1-1 | 5 | CH_spa_70 | 4 | 5 | 0.00000000241563 |
| Solanum pennellii | Spenn-ch06 | 5 | CH_spe_245 | 4 | 9 | 0.0000000332649 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_457 | 3 | 5 | 0.0000107978 |
| Solanum tuberosum | ST4.03ch06 | 5 | CH_stu_191 | 5 | 10 | 0.000000000056867 |
| Selenicereus undatus | Scaffold_2055 | 5 | CH_sun_103 | 3 | 4 | 0.00000110869 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 5 | CH_tpr_454 | 3 | 8 | 0.0000576932 |
| Vigna mungo | CM024079.1 | 5 | CH_vmu_105 | 4 | 5 | 0.0000000020027 |
| Aethionema arabicum | LG-6 | 6 | CH_aar_119 | 4 | 6 | 0.0000000112713 |
| Arabidopsis lyrata | scaffold_6 | 6 | CH_aly_207 | 4 | 5 | 0.0000000545367 |
| Arabidopsis lyrata | scaffold_1 | 6 | CH_aly_30 | 8 | 11 | 3.06528e-19 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_27 | 10 | 69 | 3.54807e-20 |
| Brassica carinata | ChrC04 | 6 | CH_bca_1235 | 3 | 6 | 0.0000448813 |
| Brassica napus | C09 | 6 | CH_bna_1070 | 3 | 6 | 0.000110093 |
| Capsicum annuum | PGAv.1.6.scaffold100 | 6 | CH_can_221 | 4 | 5 | 0.00000000418527 |
| Capsicum annuum | PGAv.1.6.scaffold308 | 6 | CH_can_319 | 4 | 11 | 0.000000275721 |
| Coffea canephora | chr10 | 6 | CH_ccan_101 | 4 | 35 | 0.000000000800073 |
| Citrus clementina | scaffold_3 | 6 | CH_ccl_8 | 18 | 25 | 3.80585e-47 |
| Carpinus fangiana | Cfa03 | 6 | CH_cfa_237 | 3 | 3 | 0.000000172079 |
| Cardamine hirsuta | Chr8 | 6 | CH_chi_393 | 3 | 3 | 0.00000817004 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_46 | 8 | 13 | 3.84451e-19 |
| Cucumis melo | chr04 | 6 | CH_cme_196 | 3 | 3 | 0.000000801094 |
| Capsella rubella | scaffold_6 | 6 | CH_cru_105 | 5 | 5 | 0.00000000000332382 |
| Capsella rubella | scaffold_1 | 6 | CH_cru_68 | 6 | 6 | 0.00000000000000182293 |
| Cucumis sativus L. | chr3 | 6 | CH_csa_234 | 3 | 3 | 0.00000229961 |
| Cucumis sativus L. | chr5 | 6 | CH_csa_271 | 3 | 4 | 0.00000919547 |
| Erythranthe guttata | scaffold_12 | 6 | CH_egut_67 | 7 | 7 | 4.0645e-18 |
| Eutrema salsugineum | scaffold_5 | 6 | CH_esa_235 | 3 | 3 | 0.00000316627 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_379 | 4 | 6 | 0.0000000189846 |
| Helianthus annuus | HanXRQChr13 | 6 | CH_han_616 | 3 | 3 | 0.00000344952 |
| Medicago truncatula | chr4 | 6 | CH_mtr_443 | 4 | 9 | 0.00000000864629 |
| Prasinoderma coloniale | Chr21 | 6 | CH_pco_12 | 2 | 2 | 0.000837404 |
| Punica granatum | NC_045130.1 | 6 | CH_pgr_16 | 10 | 21 | 5.65554e-25 |
| Papaver somniferum | NW_020620714.1 | 6 | CH_pso_105 | 6 | 9 | 2.03593e-16 |
| Phaseolus vulgaris | Chr05 | 6 | CH_pvu_348 | 3 | 4 | 0.00000534308 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_74 | 11 | 67 | 3.80619e-23 |
| Salvia bowleyana | GWHASIU00000005 | 6 | CH_sbo_417 | 3 | 7 | 0.00000912463 |
| Sechium edule | LG04 | 6 | CH_sed_170 | 4 | 9 | 0.000000249358 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_55 | 13 | 26 | 7.65988e-35 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_270 | 4 | 9 | 0.0000000252003 |
| Schrenkiella parvula | ch1-1 | 6 | CH_spa_70 | 4 | 5 | 0.00000000241563 |
| Solanum pennellii | Spenn-ch06 | 6 | CH_spe_245 | 4 | 9 | 0.0000000332649 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_457 | 3 | 5 | 0.0000107978 |
| Solanum tuberosum | ST4.03ch06 | 6 | CH_stu_191 | 5 | 10 | 0.000000000056867 |
| Selenicereus undatus | Scaffold_2055 | 6 | CH_sun_103 | 3 | 4 | 0.00000110869 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 6 | CH_tpr_454 | 3 | 8 | 0.0000576932 |
| Vigna mungo | CM024079.1 | 6 | CH_vmu_105 | 4 | 5 | 0.0000000020027 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |