Functional clusters
Information
- Type InterPro
- Description Partial AB-hydrolase lipase domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00074 | 5 | CH_atr_292 | 3 | 8 | 0.00000529868 |
| Camellia sinensis var. sinensis | Chr7 | 5 | CH_camsi_311 | 4 | 7 | 0.000000000708507 |
| Cannabis sativa | NC_044376.1 | 5 | CH_cansat_221 | 3 | 3 | 0.000000226376 |
| Daucus carota | DCARv2_Chr1 | 5 | CH_dca_58 | 5 | 5 | 0.000000000000768008 |
| Durio zibethinus | NW_019167893.1 | 5 | CH_dzi_633 | 2 | 2 | 0.000973326 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_162 | 4 | 4 | 0.000000000077286 |
| Magnolia biondii | Chr07 | 5 | CH_mbi_272 | 4 | 9 | 0.0000000030297 |
| Malus domestica | Chr17 | 5 | CH_mdo_596 | 3 | 4 | 0.00000142347 |
| Malus domestica | Chr09 | 5 | CH_mdo_597 | 3 | 4 | 0.00000142347 |
| Prunus persica | Pp03 | 5 | CH_ppe_365 | 3 | 3 | 0.000000292152 |
| Populus trichocarpa | Chr14 | 5 | CH_ptr_315 | 3 | 3 | 0.000000100229 |
| Quercus lobata | CM012294 | 5 | CH_qlo_968 | 3 | 4 | 0.00000134328 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_565 | 5 | 44 | 0.0000000891607 |
| Rhododendron simsii | chr06 | 5 | CH_rsi_397 | 3 | 4 | 0.0000000999387 |
| Salvia bowleyana | GWHASIU00000005 | 5 | CH_sbo_760 | 2 | 4 | 0.000818901 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_361 | 5 | 6 | 0.0000000000000141933 |
| Theobroma cacao | Chromosome_1 | 5 | CH_tca_750 | 2 | 2 | 0.000732386 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_269 | 3 | 4 | 0.00000103607 |
| Amborella trichopoda | AmTr_v1.0_scaffold00074 | 6 | CH_atr_292 | 3 | 8 | 0.00000529868 |
| Camellia sinensis var. sinensis | Chr7 | 6 | CH_camsi_311 | 4 | 7 | 0.000000000708507 |
| Cannabis sativa | NC_044376.1 | 6 | CH_cansat_221 | 3 | 3 | 0.000000226376 |
| Daucus carota | DCARv2_Chr1 | 6 | CH_dca_58 | 5 | 5 | 0.000000000000768008 |
| Durio zibethinus | NW_019167893.1 | 6 | CH_dzi_633 | 2 | 2 | 0.000973326 |
| Fragaria x ananassa | Fvb6-2 | 6 | CH_fan_543 | 3 | 3 | 0.00000366696 |
| Fragaria x ananassa | Fvb6-1 | 6 | CH_fan_980 | 3 | 9 | 0.000307585 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_162 | 4 | 4 | 0.000000000077286 |
| Magnolia biondii | Chr07 | 6 | CH_mbi_272 | 4 | 9 | 0.0000000030297 |
| Malus domestica | Chr17 | 6 | CH_mdo_596 | 3 | 4 | 0.00000142347 |
| Malus domestica | Chr09 | 6 | CH_mdo_597 | 3 | 4 | 0.00000142347 |
| Prunus persica | Pp03 | 6 | CH_ppe_365 | 3 | 3 | 0.000000292152 |
| Populus trichocarpa | Chr14 | 6 | CH_ptr_315 | 3 | 3 | 0.000000100229 |
| Quercus lobata | CM012294 | 6 | CH_qlo_968 | 3 | 4 | 0.00000134328 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_565 | 5 | 44 | 0.0000000891607 |
| Rhododendron simsii | chr06 | 6 | CH_rsi_397 | 3 | 4 | 0.0000000999387 |
| Salvia bowleyana | GWHASIU00000005 | 6 | CH_sbo_760 | 2 | 4 | 0.000818901 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_361 | 5 | 6 | 0.0000000000000141933 |
| Theobroma cacao | Chromosome_1 | 6 | CH_tca_750 | 2 | 2 | 0.000732386 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_269 | 3 | 4 | 0.00000103607 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |