Functional clusters
Information
- Type InterPro
- Description Zinc finger, PMZ-type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_310 | 3 | 4 | 0.00000561308 |
| Carya illinoinensis | Chr03 | 5 | CH_cil_842 | 3 | 3 | 0.000723716 |
| Hydrangea macrophylla | Hma1.2p1_0357F.1 | 5 | CH_hma_493 | 5 | 13 | 0.00019819 |
| Prunus persica | Pp03 | 5 | CH_ppe_643 | 3 | 3 | 0.00013535 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_399 | 3 | 3 | 0.0000344328 |
| Papaver somniferum | NC_039359.1 | 5 | CH_pso_1007 | 6 | 24 | 0.000181453 |
| Theobroma cacao | Chromosome_6 | 5 | CH_tca_448 | 3 | 3 | 0.000012391 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_221 | 5 | CH_tpr_636 | 3 | 3 | 0.000238266 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_310 | 3 | 4 | 0.00000561308 |
| Carya illinoinensis | Chr03 | 6 | CH_cil_842 | 3 | 3 | 0.000723716 |
| Hydrangea macrophylla | Hma1.2p1_0357F.1 | 6 | CH_hma_493 | 5 | 13 | 0.00019819 |
| Prunus persica | Pp03 | 6 | CH_ppe_643 | 3 | 3 | 0.00013535 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_399 | 3 | 3 | 0.0000344328 |
| Papaver somniferum | NC_039359.1 | 6 | CH_pso_1007 | 6 | 24 | 0.000181453 |
| Theobroma cacao | Chromosome_6 | 6 | CH_tca_448 | 3 | 3 | 0.000012391 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_221 | 6 | CH_tpr_636 | 3 | 3 | 0.000238266 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |