Functional clusters
Information
- Type InterPro
- Description Conserved hypothetical protein CHP01589, plant
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | A02 | 5 | CH_bna_383 | 6 | 75 | 0.0000000270636 |
| Brassica oleracea | C2 | 5 | CH_bol_178 | 5 | 26 | 0.00000000652035 |
| Brassica rapa | A02 | 5 | CH_bra_8 | 8 | 13 | 1.1771e-19 |
| Eucalyptus grandis | Chr07 | 5 | CH_egr_1037 | 3 | 10 | 0.0000517362 |
| Lupinus albus | Lalb_Chr17 | 5 | CH_lal_218 | 4 | 13 | 0.000000309752 |
| Lonicera japonica | GWHAAZE00000009 | 5 | CH_lonja_1156 | 2 | 2 | 0.000598874 |
| Physcomitrium patens | Chr14 | 5 | CH_ppa_234 | 2 | 2 | 0.000183818 |
| Rhododendron simsii | chr05 | 5 | CH_rsi_436 | 3 | 3 | 0.000000349805 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1273 | 3 | 3 | 0.00000101811 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_1398 | 3 | 4 | 0.00000407161 |
| Sapria himalayana | scaffold67_2653777 | 5 | CH_shi_83 | 3 | 3 | 0.00000000490454 |
| Theobroma cacao | Chromosome_10 | 5 | CH_tca_437 | 3 | 6 | 0.00000900697 |
| Vitis vinifera | chrUn | 5 | CH_vvi_354 | 3 | 3 | 0.00000104144 |
| Brassica napus | A02 | 6 | CH_bna_383 | 6 | 75 | 0.0000000270636 |
| Brassica oleracea | C2 | 6 | CH_bol_178 | 5 | 26 | 0.00000000652035 |
| Brassica rapa | A02 | 6 | CH_bra_8 | 8 | 13 | 1.1771e-19 |
| Eucalyptus grandis | Chr07 | 6 | CH_egr_1037 | 3 | 10 | 0.0000517362 |
| Lupinus albus | Lalb_Chr17 | 6 | CH_lal_218 | 4 | 13 | 0.000000309752 |
| Lonicera japonica | GWHAAZE00000009 | 6 | CH_lonja_1156 | 2 | 2 | 0.000598874 |
| Physcomitrium patens | Chr14 | 6 | CH_ppa_234 | 2 | 2 | 0.000183818 |
| Rhododendron simsii | chr05 | 6 | CH_rsi_436 | 3 | 3 | 0.000000349805 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1273 | 3 | 3 | 0.00000101811 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_1398 | 3 | 4 | 0.00000407161 |
| Sapria himalayana | scaffold67_2653777 | 6 | CH_shi_83 | 3 | 3 | 0.00000000490454 |
| Theobroma cacao | Chromosome_10 | 6 | CH_tca_437 | 3 | 6 | 0.00000900697 |
| Vitis vinifera | chrUn | 6 | CH_vvi_354 | 3 | 3 | 0.00000104144 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |