Functional clusters

Information

  • Type InterPro
  • Description P-type ATPase, subfamily IIB

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr8_EL10_PGA_scaffold4 5 CH_bvu_239 3 3 0.00000123386
Camellia sinensis var. sinensis Chr5 5 CH_camsi_29 11 28 1.18342e-24
Citrus clementina scaffold_5 5 CH_ccl_447 3 4 0.0000183637
Carpinus fangiana Cfa03 5 CH_cfa_130 5 8 0.0000000000602985
Carya illinoinensis Chr02 5 CH_cil_170 5 5 0.00000000000728319
Carya illinoinensis Chr07 5 CH_cil_273 4 4 0.0000000106811
Carya illinoinensis Chr01 5 CH_cil_549 3 4 0.0000599011
Daucus carota DCARv2_Chr8 5 CH_dca_453 3 6 0.0000828899
Davidia involucrata GWHABJS00000002 5 CH_din_95 6 10 0.000000000000339842
Durio zibethinus NW_019168004.1 5 CH_dzi_150 4 5 0.00000000723425
Eucalyptus grandis Chr08 5 CH_egr_62 12 13 7.01009e-32
Eucalyptus grandis Chr08 5 CH_egr_70 12 15 2.45034e-30
Lonicera japonica GWHAAZE00000003 5 CH_lonja_256 5 8 0.0000000000334034
Nelumbo nucifera chr6 5 CH_nnu_78 5 8 0.00000000000987016
Punica granatum NC_045128.1 5 CH_pgr_359 3 5 0.0000139283
Prunus persica Pp01 5 CH_ppe_248 4 4 0.00000000170002
Prunus persica Pp07 5 CH_ppe_445 3 3 0.00000379798
Quercus lobata 11 5 CH_qlo_481 5 6 0.0000000000314116
Sequoiadendron giganteum chr5 5 CH_sgi_2003 2 2 0.000146145
Selaginella moellendorffii scaffold_1 5 CH_smo_371 2 2 0.000933707
Trochodendron aralioides group17 5 CH_tar_115 6 15 0.0000000000518666
Trochodendron aralioides group2 5 CH_tar_28 9 17 8.28857e-20
Beta vulgaris Chr8_EL10_PGA_scaffold4 6 CH_bvu_239 3 3 0.00000123386
Camellia sinensis var. sinensis Chr5 6 CH_camsi_29 11 28 1.18342e-24
Citrus clementina scaffold_5 6 CH_ccl_447 3 4 0.0000183637
Carpinus fangiana Cfa03 6 CH_cfa_130 5 8 0.0000000000602985
Carya illinoinensis Chr02 6 CH_cil_170 5 5 0.00000000000728319
Carya illinoinensis Chr07 6 CH_cil_273 4 4 0.0000000106811
Carya illinoinensis Chr01 6 CH_cil_549 3 4 0.0000599011
Daucus carota DCARv2_Chr8 6 CH_dca_453 3 6 0.0000828899
Davidia involucrata GWHABJS00000002 6 CH_din_95 6 10 0.000000000000339842
Durio zibethinus NW_019168004.1 6 CH_dzi_150 4 5 0.00000000723425
Eucalyptus grandis Chr08 6 CH_egr_62 12 13 7.01009e-32
Eucalyptus grandis Chr08 6 CH_egr_70 12 15 2.45034e-30
Fragaria x ananassa Fvb4-2 6 CH_fan_169 5 10 0.000000000188206
Fragaria x ananassa Fvb4-3 6 CH_fan_589 4 18 0.00000648342
Lonicera japonica GWHAAZE00000003 6 CH_lonja_256 5 8 0.0000000000334034
Nelumbo nucifera chr6 6 CH_nnu_78 5 8 0.00000000000987016
Punica granatum NC_045128.1 6 CH_pgr_359 3 5 0.0000139283
Prunus persica Pp01 6 CH_ppe_248 4 4 0.00000000170002
Prunus persica Pp07 6 CH_ppe_445 3 3 0.00000379798
Quercus lobata 11 6 CH_qlo_481 5 6 0.0000000000314116
Sequoiadendron giganteum chr5 6 CH_sgi_2003 2 2 0.000146145
Selaginella moellendorffii scaffold_1 6 CH_smo_371 2 2 0.000933707
Trochodendron aralioides group17 6 CH_tar_115 6 15 0.0000000000518666
Trochodendron aralioides group2 6 CH_tar_28 9 17 8.28857e-20

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001