Functional clusters

Information

  • Type InterPro
  • Description Deglycase PfpI

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_991 2 2 0.00070497
Acer truncatum chr1 5 CH_acertr_992 2 2 0.00070497
Actinidia chinensis Lachesis_group26 5 CH_ach_343 2 2 0.000162964
Brassica napus C09 5 CH_bna_1308 2 2 0.000389795
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_346 2 2 0.0000827917
Corylus avellana 5 5 CH_cav_278 3 9 0.000000740512
Carpinus fangiana Cfa03 5 CH_cfa_581 2 3 0.000681569
Carya illinoinensis Chr03 5 CH_cil_563 2 2 0.0000619828
Citrullus lanatus CG_Chr10 5 CH_cla_211 2 2 0.0000887115
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_531 2 2 0.0000448722
Glycine max Gm18 5 CH_gma_554 2 2 0.0000379557
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_256 3 3 0.00000000396314
Magnolia biondii Chr03 5 CH_mbi_1084 2 3 0.000437077
Malus domestica Chr09 5 CH_mdo_301 3 3 0.00000000215706
Manihot esculenta Chromosome01 5 CH_mes_581 2 2 0.000183189
Medicago truncatula chr3 5 CH_mtr_541 3 7 0.000000088619
Prunus persica Pp03 5 CH_ppe_92 6 8 1.01889e-17
Populus trichocarpa Chr04 5 CH_ptr_365 3 5 0.00000050107
Populus trichocarpa Chr17 5 CH_ptr_748 2 2 0.000578001
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_146 6 17 1.9622e-16
Rhododendron simsii chr10 5 CH_rsi_670 2 2 0.0000645307
Sequoiadendron giganteum chr8 5 CH_sgi_1070 3 7 0.000000124582
Tarenaya hassleriana NW_010966881.1 5 CH_tha_245 2 2 0.000209541
Utricularia gibba unitig_748 5 CH_ugi_133 2 2 0.0000820479
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_441 2 2 0.0000929238
Acer truncatum chr6 6 CH_acertr_991 2 2 0.00070497
Acer truncatum chr1 6 CH_acertr_992 2 2 0.00070497
Actinidia chinensis Lachesis_group26 6 CH_ach_343 2 2 0.000162964
Brassica napus C09 6 CH_bna_1308 2 2 0.000389795
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_346 2 2 0.0000827917
Corylus avellana 5 6 CH_cav_278 3 9 0.000000740512
Carpinus fangiana Cfa03 6 CH_cfa_581 2 3 0.000681569
Carya illinoinensis Chr03 6 CH_cil_563 2 2 0.0000619828
Citrullus lanatus CG_Chr10 6 CH_cla_211 2 2 0.0000887115
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_531 2 2 0.0000448722
Glycine max Gm18 6 CH_gma_554 2 2 0.0000379557
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_256 3 3 0.00000000396314
Magnolia biondii Chr03 6 CH_mbi_1084 2 3 0.000437077
Malus domestica Chr09 6 CH_mdo_301 3 3 0.00000000215706
Manihot esculenta Chromosome01 6 CH_mes_581 2 2 0.000183189
Medicago truncatula chr3 6 CH_mtr_541 3 7 0.000000088619
Prunus persica Pp03 6 CH_ppe_92 6 8 1.01889e-17
Populus trichocarpa Chr04 6 CH_ptr_365 3 5 0.00000050107
Populus trichocarpa Chr17 6 CH_ptr_748 2 2 0.000578001
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_146 6 17 1.9622e-16
Rhododendron simsii chr10 6 CH_rsi_670 2 2 0.0000645307
Sequoiadendron giganteum chr8 6 CH_sgi_1070 3 7 0.000000124582
Tarenaya hassleriana NW_010966881.1 6 CH_tha_245 2 2 0.000209541
Utricularia gibba unitig_748 6 CH_ugi_133 2 2 0.0000820479
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_441 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001