Functional clusters

Information

  • Type InterPro
  • Description Aconitase/Iron-responsive element-binding protein 2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_315 3 3 0.000000260925
Acer truncatum chr2 5 CH_acertr_420 3 6 0.0000052163
Actinidia chinensis Lachesis_group26 5 CH_ach_158 3 3 0.00000097379
Brassica carinata ChrC07 5 CH_bca_2138 2 2 0.000961939
Brassica oleracea C4 5 CH_bol_847 2 2 0.000686409
Camellia sinensis var. sinensis Chr5 5 CH_camsi_102 8 40 7.74718e-16
Camellia sinensis var. sinensis Chr5 5 CH_camsi_717 3 3 0.00000305628
Capsicum annuum PGAv.1.6.scaffold80 5 CH_can_689 2 2 0.000247831
Cucumis sativus L. chr3 5 CH_csa_179 3 3 0.000000104528
Daucus carota DCARv2_Chr6 5 CH_dca_516 2 2 0.000191333
Davidia involucrata GWHABJS00000001 5 CH_din_732 2 2 0.000500125
Gossypium raimondii Chr09 5 CH_gra_412 3 12 0.000053054
Malus domestica Chr03 5 CH_mdo_1303 2 2 0.000568817
Petunia axillaris Peaxi162Scf00660 5 CH_pax_701 2 2 0.000703556
Pisum sativum chr5LG3 5 CH_psa_764 2 3 0.000938886
Salix brachista GWHAAZH00000007 5 CH_sbr_316 3 3 0.00000170351
Simmondsia chinensis GWHAASQ00000021 5 CH_sci_49 5 12 0.0000000000018724
Trochodendron aralioides group3 5 CH_tar_774 2 2 0.00036022
Theobroma cacao Chromosome_7 5 CH_tca_368 4 34 0.000000817584
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_765 2 2 0.000756974
Vigna mungo CM024076.1 5 CH_vmu_519 2 2 0.000387685
Vanilla planifolia CM028160.1 5 CH_vpl_68 4 4 0.000000000254162
Acer truncatum chr6 6 CH_acertr_315 3 3 0.000000260925
Acer truncatum chr2 6 CH_acertr_420 3 6 0.0000052163
Actinidia chinensis Lachesis_group26 6 CH_ach_158 3 3 0.00000097379
Brassica carinata ChrC07 6 CH_bca_2138 2 2 0.000961939
Brassica oleracea C4 6 CH_bol_847 2 2 0.000686409
Camellia sinensis var. sinensis Chr5 6 CH_camsi_102 8 40 7.74718e-16
Camellia sinensis var. sinensis Chr5 6 CH_camsi_717 3 3 0.00000305628
Capsicum annuum PGAv.1.6.scaffold80 6 CH_can_689 2 2 0.000247831
Cucumis melo chr06 6 CH_cme_419 2 2 0.000400267
Cucumis sativus L. chr3 6 CH_csa_179 3 3 0.000000104528
Daucus carota DCARv2_Chr6 6 CH_dca_516 2 2 0.000191333
Davidia involucrata GWHABJS00000001 6 CH_din_732 2 2 0.000500125
Gossypium raimondii Chr09 6 CH_gra_412 3 12 0.000053054
Malus domestica Chr03 6 CH_mdo_1303 2 2 0.000568817
Petunia axillaris Peaxi162Scf00660 6 CH_pax_701 2 2 0.000703556
Pisum sativum chr5LG3 6 CH_psa_764 2 3 0.000938886
Salix brachista GWHAAZH00000007 6 CH_sbr_316 3 3 0.00000170351
Simmondsia chinensis GWHAASQ00000021 6 CH_sci_49 5 12 0.0000000000018724
Trochodendron aralioides group3 6 CH_tar_774 2 2 0.00036022
Theobroma cacao Chromosome_7 6 CH_tca_368 4 34 0.000000817584
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_765 2 2 0.000756974
Vigna mungo CM024076.1 6 CH_vmu_519 2 2 0.000387685
Vanilla planifolia CM028160.1 6 CH_vpl_68 4 4 0.000000000254162

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001