Functional clusters
Information
- Type InterPro
- Description Cation/H+ exchanger
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group23 | 5 | CH_ach_287 | 3 | 3 | 0.0000586222 |
| Arabidopsis lyrata | scaffold_5 | 5 | CH_aly_415 | 3 | 3 | 0.0000597242 |
| Arabidopsis lyrata | scaffold_1 | 5 | CH_aly_560 | 3 | 4 | 0.000238676 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_256 | 4 | 8 | 0.000000499223 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_339 | 3 | 3 | 0.0000131244 |
| Camellia sinensis var. sinensis | Chr3 | 5 | CH_camsi_304 | 8 | 79 | 0.000000000588643 |
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_451 | 4 | 4 | 0.0000000392687 |
| Corylus avellana | 6 | 5 | CH_cav_296 | 5 | 21 | 0.00000123331 |
| Citrus clementina | scaffold_4 | 5 | CH_ccl_142 | 6 | 7 | 0.00000000000306615 |
| Citrus clementina | scaffold_7 | 5 | CH_ccl_578 | 3 | 3 | 0.00011588 |
| Citrus clementina | scaffold_6 | 5 | CH_ccl_688 | 3 | 4 | 0.000462944 |
| Ceratophyllum demersum | 5 | 5 | CH_cde_57 | 5 | 10 | 0.0000000124423 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_253 | 4 | 4 | 0.000000100338 |
| Cardamine hirsuta | Chr4 | 5 | CH_chi_808 | 3 | 5 | 0.000762413 |
| Citrullus lanatus | CG_Chr07 | 5 | CH_cla_241 | 4 | 16 | 0.00011852 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 5 | CH_cqu_698 | 4 | 13 | 0.000102864 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1480 | 5 | CH_cqu_702 | 3 | 3 | 0.00010948 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 5 | CH_cqu_871 | 5 | 48 | 0.000309262 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1280 | 5 | CH_cqu_904 | 3 | 4 | 0.000437474 |
| Capsella rubella | scaffold_5 | 5 | CH_cru_429 | 3 | 3 | 0.0000623084 |
| Capsella rubella | scaffold_1 | 5 | CH_cru_430 | 3 | 3 | 0.0000623084 |
| Cucumis sativus L. | chr4 | 5 | CH_csa_170 | 4 | 4 | 0.0000000549145 |
| Glycine max | Gm14 | 5 | CH_gma_605 | 3 | 3 | 0.0000988871 |
| Gossypium raimondii | Chr04 | 5 | CH_gra_161 | 5 | 5 | 0.000000000161041 |
| Gossypium raimondii | Chr08 | 5 | CH_gra_449 | 3 | 3 | 0.0000952791 |
| Gossypium raimondii | Chr03 | 5 | CH_gra_690 | 3 | 5 | 0.000950864 |
| Hydrangea macrophylla | Hma1.2p1_0292F.1 | 5 | CH_hma_209 | 3 | 3 | 0.00000673812 |
| Magnolia biondii | Chr15 | 5 | CH_mbi_210 | 6 | 23 | 0.000000000140267 |
| Malus domestica | Chr11 | 5 | CH_mdo_1340 | 4 | 22 | 0.000656887 |
| Malus domestica | Chr07 | 5 | CH_mdo_871 | 4 | 13 | 0.0000647286 |
| Medicago truncatula | chr5 | 5 | CH_mtr_1227 | 3 | 4 | 0.000346293 |
| Medicago truncatula | chr7 | 5 | CH_mtr_1444 | 3 | 5 | 0.000864955 |
| Medicago truncatula | chr5 | 5 | CH_mtr_764 | 4 | 7 | 0.00000354141 |
| Medicago truncatula | chr5 | 5 | CH_mtr_881 | 5 | 33 | 0.0000269697 |
| Nelumbo nucifera | chr2 | 5 | CH_nnu_526 | 4 | 25 | 0.000320975 |
| Prunus persica | Pp06 | 5 | CH_ppe_217 | 5 | 5 | 0.0000000001976 |
| Prunus persica | Pp02 | 5 | CH_ppe_340 | 4 | 4 | 0.000000139401 |
| Prunus persica | Pp04 | 5 | CH_ppe_721 | 4 | 17 | 0.000326759 |
| Papaver somniferum | NW_020620714.1 | 5 | CH_pso_1114 | 3 | 4 | 0.0003697 |
| Papaver somniferum | NC_039366.1 | 5 | CH_pso_323 | 6 | 18 | 0.00000000160012 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_725 | 4 | 9 | 0.0000115072 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_381 | 4 | 9 | 0.0000166862 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_888 | 3 | 3 | 0.0000156027 |
| Rhododendron simsii | chr13 | 5 | CH_rsi_850 | 3 | 5 | 0.000309373 |
| Simmondsia chinensis | GWHAASQ00000025 | 5 | CH_sci_351 | 3 | 4 | 0.000237085 |
| Sechium edule | LG06 | 5 | CH_sed_306 | 3 | 3 | 0.0000499696 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1560 | 4 | 29 | 0.0000395794 |
| Schrenkiella parvula | ch6-6 | 5 | CH_spa_254 | 3 | 3 | 0.0000918733 |
| Theobroma cacao | Chromosome_5 | 5 | CH_tca_503 | 3 | 3 | 0.0000481481 |
| Tarenaya hassleriana | NW_010969548.1 | 5 | CH_tha_187 | 3 | 3 | 0.0000617361 |
| Tarenaya hassleriana | NW_010967707.1 | 5 | CH_tha_188 | 3 | 3 | 0.0000617361 |
| Vanilla planifolia | CM028155.1 | 5 | CH_vpl_336 | 3 | 3 | 0.0000332492 |
| Vanilla planifolia | JADCNL010000016.1 | 5 | CH_vpl_337 | 3 | 3 | 0.0000332492 |
| Vitis vinifera | chr2 | 5 | CH_vvi_153 | 5 | 5 | 0.0000000000426653 |
| Vitis vinifera | chr6 | 5 | CH_vvi_407 | 4 | 9 | 0.00000521221 |
| Actinidia chinensis | Lachesis_group23 | 6 | CH_ach_287 | 3 | 3 | 0.0000586222 |
| Arabidopsis lyrata | scaffold_5 | 6 | CH_aly_415 | 3 | 3 | 0.0000597242 |
| Arabidopsis lyrata | scaffold_1 | 6 | CH_aly_560 | 3 | 4 | 0.000238676 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_256 | 4 | 8 | 0.000000499223 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_339 | 3 | 3 | 0.0000131244 |
| Camellia sinensis var. sinensis | Chr3 | 6 | CH_camsi_304 | 8 | 79 | 0.000000000588643 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_451 | 4 | 4 | 0.0000000392687 |
| Corylus avellana | 6 | 6 | CH_cav_296 | 5 | 21 | 0.00000123331 |
| Citrus clementina | scaffold_4 | 6 | CH_ccl_142 | 6 | 7 | 0.00000000000306615 |
| Citrus clementina | scaffold_7 | 6 | CH_ccl_578 | 3 | 3 | 0.00011588 |
| Citrus clementina | scaffold_6 | 6 | CH_ccl_688 | 3 | 4 | 0.000462944 |
| Ceratophyllum demersum | 5 | 6 | CH_cde_57 | 5 | 10 | 0.0000000124423 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_253 | 4 | 4 | 0.000000100338 |
| Cardamine hirsuta | Chr4 | 6 | CH_chi_808 | 3 | 5 | 0.000762413 |
| Citrullus lanatus | CG_Chr07 | 6 | CH_cla_241 | 4 | 16 | 0.00011852 |
| Cucumis melo | chr07 | 6 | CH_cme_275 | 3 | 3 | 0.0000331119 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 6 | CH_cqu_698 | 4 | 13 | 0.000102864 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1480 | 6 | CH_cqu_702 | 3 | 3 | 0.00010948 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 6 | CH_cqu_871 | 5 | 48 | 0.000309262 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1280 | 6 | CH_cqu_904 | 3 | 4 | 0.000437474 |
| Capsella rubella | scaffold_5 | 6 | CH_cru_429 | 3 | 3 | 0.0000623084 |
| Capsella rubella | scaffold_1 | 6 | CH_cru_430 | 3 | 3 | 0.0000623084 |
| Cucumis sativus L. | chr4 | 6 | CH_csa_170 | 4 | 4 | 0.0000000549145 |
| Glycine max | Gm14 | 6 | CH_gma_605 | 3 | 3 | 0.0000988871 |
| Gossypium raimondii | Chr04 | 6 | CH_gra_161 | 5 | 5 | 0.000000000161041 |
| Gossypium raimondii | Chr08 | 6 | CH_gra_449 | 3 | 3 | 0.0000952791 |
| Gossypium raimondii | Chr03 | 6 | CH_gra_690 | 3 | 5 | 0.000950864 |
| Hydrangea macrophylla | Hma1.2p1_0292F.1 | 6 | CH_hma_209 | 3 | 3 | 0.00000673812 |
| Magnolia biondii | Chr15 | 6 | CH_mbi_210 | 6 | 23 | 0.000000000140267 |
| Malus domestica | Chr11 | 6 | CH_mdo_1340 | 4 | 22 | 0.000656887 |
| Malus domestica | Chr07 | 6 | CH_mdo_871 | 4 | 13 | 0.0000647286 |
| Medicago truncatula | chr5 | 6 | CH_mtr_1227 | 3 | 4 | 0.000346293 |
| Medicago truncatula | chr7 | 6 | CH_mtr_1444 | 3 | 5 | 0.000864955 |
| Medicago truncatula | chr5 | 6 | CH_mtr_764 | 4 | 7 | 0.00000354141 |
| Medicago truncatula | chr5 | 6 | CH_mtr_881 | 5 | 33 | 0.0000269697 |
| Nelumbo nucifera | chr2 | 6 | CH_nnu_526 | 4 | 25 | 0.000320975 |
| Prunus persica | Pp06 | 6 | CH_ppe_217 | 5 | 5 | 0.0000000001976 |
| Prunus persica | Pp02 | 6 | CH_ppe_340 | 4 | 4 | 0.000000139401 |
| Prunus persica | Pp04 | 6 | CH_ppe_721 | 4 | 17 | 0.000326759 |
| Papaver somniferum | NW_020620714.1 | 6 | CH_pso_1114 | 3 | 4 | 0.0003697 |
| Papaver somniferum | NC_039366.1 | 6 | CH_pso_323 | 6 | 18 | 0.00000000160012 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_725 | 4 | 9 | 0.0000115072 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_381 | 4 | 9 | 0.0000166862 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_888 | 3 | 3 | 0.0000156027 |
| Rhododendron simsii | chr13 | 6 | CH_rsi_850 | 3 | 5 | 0.000309373 |
| Simmondsia chinensis | GWHAASQ00000025 | 6 | CH_sci_351 | 3 | 4 | 0.000237085 |
| Sechium edule | LG06 | 6 | CH_sed_306 | 3 | 3 | 0.0000499696 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1560 | 4 | 29 | 0.0000395794 |
| Schrenkiella parvula | ch6-6 | 6 | CH_spa_254 | 3 | 3 | 0.0000918733 |
| Theobroma cacao | Chromosome_5 | 6 | CH_tca_503 | 3 | 3 | 0.0000481481 |
| Tarenaya hassleriana | NW_010969548.1 | 6 | CH_tha_187 | 3 | 3 | 0.0000617361 |
| Tarenaya hassleriana | NW_010967707.1 | 6 | CH_tha_188 | 3 | 3 | 0.0000617361 |
| Vanilla planifolia | CM028155.1 | 6 | CH_vpl_336 | 3 | 3 | 0.0000332492 |
| Vanilla planifolia | JADCNL010000016.1 | 6 | CH_vpl_337 | 3 | 3 | 0.0000332492 |
| Vitis vinifera | chr2 | 6 | CH_vvi_153 | 5 | 5 | 0.0000000000426653 |
| Vitis vinifera | chr6 | 6 | CH_vvi_407 | 4 | 9 | 0.00000521221 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |