Functional clusters
Information
- Type InterPro
- Description FAD linked oxidase, N-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group17 | 5 | CH_ach_637 | 3 | 10 | 0.000937823 |
| Arabidopsis lyrata | scaffold_4 | 5 | CH_aly_472 | 3 | 3 | 0.000113031 |
| Amborella trichopoda | AmTr_v1.0_scaffold00038 | 5 | CH_atr_149 | 4 | 4 | 0.0000000072878 |
| Brassica carinata | ChrC06 | 5 | CH_bca_1032 | 4 | 8 | 0.00000868779 |
| Brassica carinata | ChrB03 | 5 | CH_bca_696 | 4 | 5 | 0.000000622139 |
| Brassica napus | C02 | 5 | CH_bna_1405 | 3 | 4 | 0.000580083 |
| Brassica napus | C05 | 5 | CH_bna_735 | 4 | 7 | 0.00000550176 |
| Brassica napus | C09 | 5 | CH_bna_736 | 4 | 7 | 0.00000550176 |
| Brassica oleracea | C9 | 5 | CH_bol_326 | 4 | 6 | 0.000000875317 |
| Brassica oleracea | C2 | 5 | CH_bol_828 | 3 | 5 | 0.000605208 |
| Brassica rapa | A06 | 5 | CH_bra_598 | 3 | 5 | 0.000851533 |
| Brassica rapa | A09 | 5 | CH_bra_65 | 6 | 10 | 0.0000000000277881 |
| Cicer arietinum L. | Ca_LG1_v3 | 5 | CH_car_17 | 7 | 19 | 0.00000000000177895 |
| Cicer arietinum L. | Ca_LG6_v3 | 5 | CH_car_32 | 5 | 6 | 0.000000000235163 |
| Carya illinoinensis | Chr09 | 5 | CH_cil_1 | 29 | 40 | 1.96219e-71 |
| Durio zibethinus | NW_019168037.1 | 5 | CH_dzi_63 | 8 | 21 | 0.0000000000000981704 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 5 | CH_eca_670 | 3 | 4 | 0.000251386 |
| Gossypium hirsutum | A10 | 5 | CH_ghi_62 | 11 | 12 | 1.32706e-25 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_223 | 8 | 19 | 0.00000000000186747 |
| Nicotiana tabacum | Nitab4.5_0000777 | 5 | CH_nta_180 | 3 | 3 | 0.0000659953 |
| Punica granatum | NC_045128.1 | 5 | CH_pgr_532 | 3 | 5 | 0.000379014 |
| Pisum sativum | chr1LG6 | 5 | CH_psa_54 | 9 | 34 | 0.00000000000000178261 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_1031 | 5 | 9 | 0.0000000595058 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_242 | 8 | 8 | 1.71578e-18 |
| Schrenkiella parvula | ch7-4 | 5 | CH_spa_20 | 7 | 9 | 0.0000000000000151553 |
| Solanum pennellii | Spenn-ch02 | 5 | CH_spe_130 | 5 | 6 | 0.000000000115833 |
| Solanum pennellii | Spenn-ch06 | 5 | CH_spe_511 | 3 | 3 | 0.0000293203 |
| Solanum pennellii | Spenn-ch02 | 5 | CH_spe_55 | 7 | 9 | 4.08867e-16 |
| Solanum tuberosum | ST4.03ch11 | 5 | CH_stu_564 | 3 | 3 | 0.0000452222 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_73 | 5 | 5 | 0.00000000000648634 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_142 | 4 | 4 | 0.00000000933141 |
| Vigna mungo | CM024072.1 | 5 | CH_vmu_241 | 4 | 6 | 0.00000382928 |
| Zea mays | 7 | 5 | CH_zma_534 | 3 | 7 | 0.000896072 |
| Actinidia chinensis | Lachesis_group17 | 6 | CH_ach_637 | 3 | 10 | 0.000937823 |
| Arabidopsis lyrata | scaffold_4 | 6 | CH_aly_472 | 3 | 3 | 0.000113031 |
| Amborella trichopoda | AmTr_v1.0_scaffold00038 | 6 | CH_atr_149 | 4 | 4 | 0.0000000072878 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1032 | 4 | 8 | 0.00000868779 |
| Brassica carinata | ChrB03 | 6 | CH_bca_696 | 4 | 5 | 0.000000622139 |
| Brassica napus | C02 | 6 | CH_bna_1405 | 3 | 4 | 0.000580083 |
| Brassica napus | C05 | 6 | CH_bna_735 | 4 | 7 | 0.00000550176 |
| Brassica napus | C09 | 6 | CH_bna_736 | 4 | 7 | 0.00000550176 |
| Brassica oleracea | C9 | 6 | CH_bol_326 | 4 | 6 | 0.000000875317 |
| Brassica oleracea | C2 | 6 | CH_bol_828 | 3 | 5 | 0.000605208 |
| Brassica rapa | A06 | 6 | CH_bra_598 | 3 | 5 | 0.000851533 |
| Brassica rapa | A09 | 6 | CH_bra_65 | 6 | 10 | 0.0000000000277881 |
| Cicer arietinum L. | Ca_LG1_v3 | 6 | CH_car_17 | 7 | 19 | 0.00000000000177895 |
| Cicer arietinum L. | Ca_LG6_v3 | 6 | CH_car_32 | 5 | 6 | 0.000000000235163 |
| Carya illinoinensis | Chr09 | 6 | CH_cil_1 | 29 | 40 | 1.96219e-71 |
| Durio zibethinus | NW_019168037.1 | 6 | CH_dzi_63 | 8 | 21 | 0.0000000000000981704 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 6 | CH_eca_670 | 3 | 4 | 0.000251386 |
| Fragaria x ananassa | Fvb3-2 | 6 | CH_fan_33 | 11 | 50 | 9.42199e-19 |
| Gossypium hirsutum | A10 | 6 | CH_ghi_62 | 11 | 12 | 1.32706e-25 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_223 | 8 | 19 | 0.00000000000186747 |
| Nicotiana tabacum | Nitab4.5_0000777 | 6 | CH_nta_180 | 3 | 3 | 0.0000659953 |
| Punica granatum | NC_045128.1 | 6 | CH_pgr_532 | 3 | 5 | 0.000379014 |
| Pisum sativum | chr1LG6 | 6 | CH_psa_54 | 9 | 34 | 0.00000000000000178261 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_1031 | 5 | 9 | 0.0000000595058 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_242 | 8 | 8 | 1.71578e-18 |
| Schrenkiella parvula | ch7-4 | 6 | CH_spa_20 | 7 | 9 | 0.0000000000000151553 |
| Solanum pennellii | Spenn-ch02 | 6 | CH_spe_130 | 5 | 6 | 0.000000000115833 |
| Solanum pennellii | Spenn-ch06 | 6 | CH_spe_511 | 3 | 3 | 0.0000293203 |
| Solanum pennellii | Spenn-ch02 | 6 | CH_spe_55 | 7 | 9 | 4.08867e-16 |
| Solanum tuberosum | ST4.03ch11 | 6 | CH_stu_564 | 3 | 3 | 0.0000452222 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_73 | 5 | 5 | 0.00000000000648634 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_142 | 4 | 4 | 0.00000000933141 |
| Vigna mungo | CM024072.1 | 6 | CH_vmu_241 | 4 | 6 | 0.00000382928 |
| Zea mays | 7 | 6 | CH_zma_534 | 3 | 7 | 0.000896072 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |